Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2DR7
BPC Identified: 14
Ambiguities: 0
| tRNA |
2DR7 |
1!B:31!B |
G:C |
WC [cWW][XIX] |
10.76 |
51.24; 56.48 |
5.24 |
-10.63 |
0.38 |
10.45 |
| tRNA |
2DR7 |
2!B:30!B |
G:C |
WC [cWW][XIX] |
10.6 |
54.8; 58.09 |
3.29 |
-7.48 |
0.32 |
13.42 |
| tRNA |
2DR7 |
3!B:29!B |
C:G |
WC [cWW][XIX] |
10.87 |
58.02; 54.3 |
3.73 |
-2.85 |
0.06 |
7.17 |
| tRNA |
2DR7 |
4!B:28!B |
C:G |
WC [cWW][XIX] |
10.74 |
53.75; 58.43 |
4.68 |
-2.53 |
0.04 |
8.05 |
| tRNA |
2DR7 |
5!B:27!B |
C:G |
WC [cWW][XIX] |
10.58 |
59.22; 59.22 |
0.0 |
-0.6 |
0.19 |
8.25 |
| tRNA |
2DR7 |
6!B:26!B |
G:U |
Wb [cWW][XXVIII] |
10.34 |
48.4; 79.84 |
31.45 |
-1.95 |
0.12 |
9.73 |
| tRNA |
2DR7 |
7!B:25!B |
G:C |
WC [cWW][XIX] |
11.29 |
48.23; 48.81 |
0.58 |
-6.7 |
0.15 |
17.02 |
| tRNA |
2DR7 |
8!B:24!B |
G:C |
WC [cWW][XIX] |
10.5 |
58.06; 51.28 |
6.78 |
-4.72 |
0.14 |
12.93 |
| tRNA |
2DR7 |
9!B:23!B |
G:C |
WC [cWW][XIX] |
10.93 |
49.23; 55.01 |
5.78 |
-12.08 |
0.64 |
19.65 |
| tRNA |
2DR7 |
10!B:22!B |
C:G |
WC [cWW][XIX] |
10.69 |
47.91; 52.91 |
5.0 |
-12.08 |
0.26 |
14.6 |
| tRNA |
2DR7 |
11!B:21!B |
G:C |
WC [cWW][XIX] |
10.59 |
59.11; 52.08 |
7.03 |
-14.76 |
0.15 |
13.79 |
| tRNA |
2DR7 |
12!B:20!B |
G:C |
WC [cWW][XIX] |
11.08 |
57.85; 46.84 |
11.01 |
-14.29 |
0.19 |
17.86 |
| tRNA |
2DR7 |
13!B:17!B |
U:A |
rH_1 [tWH][XXIV] |
9.58 |
40.3; 16.52 |
23.78 |
155.63 |
0.06 |
9.74 |
| tRNA |
2DR7 |
14!B:16!B |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.67 |
80.94; 37.19 |
43.75 |
-176.8 |
1.8 |
23.3 |