Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2DR9
BPC Identified: 14
Ambiguities: 0
| tRNA |
2DR9 |
1!B:31!B |
G:C |
WC [cWW][XIX] |
10.78 |
50.83; 54.58 |
3.75 |
-11.32 |
0.46 |
8.95 |
| tRNA |
2DR9 |
2!B:30!B |
G:C |
WC [cWW][XIX] |
10.57 |
50.17; 59.44 |
9.27 |
-9.75 |
0.2 |
15.73 |
| tRNA |
2DR9 |
3!B:29!B |
C:G |
WC [cWW][XIX] |
10.62 |
53.65; 50.79 |
2.85 |
-10.23 |
0.49 |
26.8 |
| tRNA |
2DR9 |
4!B:28!B |
C:G |
WC [cWW][XIX] |
10.79 |
56.05; 54.48 |
1.58 |
-2.34 |
0.01 |
7.6 |
| tRNA |
2DR9 |
5!B:27!B |
C:G |
WC [cWW][XIX] |
10.7 |
58.36; 60.79 |
2.44 |
-2.01 |
0.13 |
19.15 |
| tRNA |
2DR9 |
6!B:26!B |
G:U |
Wb [cWW][XXVIII] |
10.34 |
49.63; 76.67 |
27.04 |
0.28 |
0.35 |
5.38 |
| tRNA |
2DR9 |
7!B:25!B |
G:C |
WC [cWW][XIX] |
10.22 |
59.7; 52.79 |
6.92 |
0.46 |
0.41 |
8.11 |
| tRNA |
2DR9 |
8!B:24!B |
G:C |
WC [cWW][XIX] |
10.98 |
55.67; 47.41 |
8.26 |
-3.65 |
0.12 |
10.76 |
| tRNA |
2DR9 |
9!B:23!B |
G:C |
WC [cWW][XIX] |
10.79 |
54.27; 55.75 |
1.48 |
-8.15 |
0.68 |
17.85 |
| tRNA |
2DR9 |
10!B:22!B |
C:G |
WC [cWW][XIX] |
10.46 |
53.98; 54.25 |
0.27 |
-6.39 |
0.09 |
9.21 |
| tRNA |
2DR9 |
11!B:21!B |
G:C |
WC [cWW][XIX] |
10.67 |
53.02; 53.95 |
0.93 |
-10.84 |
0.02 |
13.99 |
| tRNA |
2DR9 |
12!B:20!B |
G:C |
WC [cWW][XIX] |
10.45 |
56.44; 55.48 |
0.96 |
-12.52 |
0.49 |
8.28 |
| tRNA |
2DR9 |
13!B:17!B |
U:A |
rH_1 [tWH][XXIV] |
10.3 |
36.4; 11.62 |
24.79 |
152.55 |
0.1 |
8.58 |
| tRNA |
2DR9 |
14!B:16!B |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.62 |
82.96; 41.09 |
41.86 |
-173.48 |
1.52 |
19.9 |