Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2DRA
BPC Identified: 14
Ambiguities: 0
| tRNA |
2DRA |
1!B:31!B |
G:C |
WC [cWW][XIX] |
10.77 |
51.55; 53.71 |
2.16 |
-9.96 |
0.35 |
9.66 |
| tRNA |
2DRA |
2!B:30!B |
G:C |
WC [cWW][XIX] |
10.55 |
51.57; 56.86 |
5.29 |
-9.94 |
0.18 |
14.61 |
| tRNA |
2DRA |
3!B:29!B |
C:G |
WC [cWW][XIX] |
10.82 |
54.79; 51.92 |
2.87 |
-7.85 |
0.42 |
18.39 |
| tRNA |
2DRA |
4!B:28!B |
C:G |
WC [cWW][XIX] |
10.55 |
56.16; 54.7 |
1.46 |
-1.51 |
0.09 |
5.91 |
| tRNA |
2DRA |
5!B:27!B |
C:G |
WC [cWW][XIX] |
10.44 |
56.74; 53.25 |
3.49 |
1.23 |
0.06 |
9.46 |
| tRNA |
2DRA |
6!B:26!B |
G:U |
Wb [cWW][XXVIII] |
10.25 |
47.51; 72.27 |
24.76 |
2.93 |
0.18 |
9.5 |
| tRNA |
2DRA |
7!B:25!B |
G:C |
WC [cWW][XIX] |
10.07 |
51.82; 59.98 |
8.16 |
1.16 |
0.29 |
9.73 |
| tRNA |
2DRA |
8!B:24!B |
G:C |
WC [cWW][XIX] |
11.09 |
54.12; 50.76 |
3.37 |
-0.86 |
0.11 |
11.37 |
| tRNA |
2DRA |
9!B:23!B |
G:C |
WC [cWW][XIX] |
10.94 |
56.83; 51.79 |
5.04 |
-4.62 |
0.29 |
19.87 |
| tRNA |
2DRA |
10!B:22!B |
C:G |
WC [cWW][XIX] |
10.46 |
54.94; 52.96 |
1.98 |
-4.69 |
0.02 |
8.36 |
| tRNA |
2DRA |
11!B:21!B |
G:C |
WC [cWW][XIX] |
10.63 |
52.91; 52.45 |
0.46 |
-10.25 |
0.04 |
12.25 |
| tRNA |
2DRA |
12!B:20!B |
G:C |
WC [cWW][XIX] |
10.52 |
56.56; 56.83 |
0.27 |
-13.51 |
0.09 |
16.63 |
| tRNA |
2DRA |
13!B:17!B |
U:A |
rH_1 [tWH][XXIV] |
10.0 |
38.72; 12.7 |
26.03 |
154.62 |
0.04 |
8.74 |
| tRNA |
2DRA |
14!B:16!B |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.83 |
79.84; 40.76 |
39.08 |
-169.41 |
2.0 |
24.39 |