Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2DRB
BPC Identified: 14
Ambiguities: 0
| tRNA |
2DRB |
1!B:31!B |
G:C |
WC [cWW][XIX] |
10.78 |
50.8; 53.03 |
2.23 |
-10.03 |
0.38 |
12.39 |
| tRNA |
2DRB |
2!B:30!B |
G:C |
WC [cWW][XIX] |
10.59 |
53.66; 57.39 |
3.73 |
-8.24 |
0.35 |
14.06 |
| tRNA |
2DRB |
3!B:29!B |
C:G |
WC [cWW][XIX] |
10.66 |
52.23; 53.09 |
0.86 |
-10.13 |
0.53 |
26.89 |
| tRNA |
2DRB |
4!B:28!B |
C:G |
WC [cWW][XIX] |
10.54 |
56.55; 52.85 |
3.7 |
-2.94 |
0.18 |
17.08 |
| tRNA |
2DRB |
5!B:27!B |
C:G |
WC [cWW][XIX] |
10.49 |
56.45; 52.86 |
3.59 |
3.67 |
0.0 |
11.3 |
| tRNA |
2DRB |
6!B:26!B |
G:U |
Wb [cWW][XXVIII] |
10.35 |
49.73; 67.91 |
18.18 |
0.32 |
0.32 |
9.78 |
| tRNA |
2DRB |
7!B:25!B |
G:C |
WC [cWW][XIX] |
10.02 |
52.11; 56.93 |
4.82 |
-2.01 |
0.22 |
12.72 |
| tRNA |
2DRB |
8!B:24!B |
G:C |
WC [cWW][XIX] |
10.74 |
57.42; 48.94 |
8.48 |
-4.29 |
0.24 |
8.48 |
| tRNA |
2DRB |
9!B:23!B |
G:C |
WC [cWW][XIX] |
10.41 |
55.83; 58.16 |
2.33 |
-7.09 |
0.49 |
18.97 |
| tRNA |
2DRB |
10!B:22!B |
C:G |
WC [cWW][XIX] |
10.63 |
51.05; 54.5 |
3.44 |
-4.41 |
0.12 |
9.36 |
| tRNA |
2DRB |
11!B:21!B |
G:C |
WC [cWW][XIX] |
10.89 |
53.69; 51.65 |
2.04 |
-10.28 |
0.21 |
11.44 |
| tRNA |
2DRB |
12!B:20!B |
G:C |
WC [cWW][XIX] |
10.39 |
57.56; 52.17 |
5.39 |
-11.9 |
0.18 |
13.37 |
| tRNA |
2DRB |
13!B:17!B |
U:A |
rH_1 [tWH][XXIV] |
9.84 |
41.72; 14.25 |
27.47 |
147.25 |
0.28 |
7.26 |
| tRNA |
2DRB |
14!B:16!B |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.72 |
81.35; 38.57 |
42.79 |
-171.3 |
1.55 |
24.04 |