Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2ESJ
BPC Identified: 18
Ambiguities: 0
rRNA |
2ESJ |
2!A:45!B |
G:C |
WC [cWW][XIX] |
10.34 |
49.21; 58.33 |
9.12 |
-9.19 |
0.06 |
10.35 |
rRNA |
2ESJ |
3!A:44!B |
C:G |
WC [cWW][XIX] |
10.59 |
48.55; 54.83 |
6.28 |
-11.68 |
0.07 |
13.51 |
rRNA |
2ESJ |
4!A:43!B |
G:C |
WC [cWW][XIX] |
10.62 |
53.22; 55.06 |
1.84 |
-7.87 |
0.06 |
11.48 |
rRNA |
2ESJ |
5!A:42!B |
U:U |
Wb_mo [cWW][XVI] |
10.71 |
30.33; 54.83 |
24.49 |
5.93 |
0.29 |
16.86 |
rRNA |
2ESJ |
6!A:41!B |
C:G |
WC [cWW][XIX] |
10.52 |
56.76; 55.22 |
1.54 |
3.8 |
0.19 |
6.0 |
rRNA |
2ESJ |
8!A:38!B |
C:G |
WC [cWW][XIX] |
10.54 |
56.2; 54.16 |
2.04 |
-12.87 |
0.16 |
17.29 |
rRNA |
2ESJ |
9!A:37!B |
A:U |
WC [cWW][XX] |
10.15 |
61.74; 60.94 |
0.8 |
-15.42 |
0.04 |
18.24 |
rRNA |
2ESJ |
10!A:36!B |
C:G |
WC [cWW][XIX] |
10.66 |
55.93; 52.09 |
3.84 |
-17.3 |
0.85 |
28.87 |
rRNA |
2ESJ |
11!A:35!B |
C:G |
WC [cWW][XIX] |
10.83 |
53.06; 51.04 |
2.03 |
-7.96 |
0.11 |
11.67 |
rRNA |
2ESJ |
12!A:34!B |
G:C |
WC [cWW][XIX] |
10.48 |
53.99; 51.5 |
2.49 |
-12.67 |
0.06 |
12.18 |
rRNA |
2ESJ |
13!A:33!B |
G:C |
WC [cWW][XIX] |
10.61 |
53.9; 54.92 |
1.01 |
-15.93 |
0.39 |
21.4 |
rRNA |
2ESJ |
14!A:32!B |
U:A |
WC [cWW][XX] |
10.33 |
58.47; 53.05 |
5.42 |
-16.26 |
0.4 |
15.7 |
rRNA |
2ESJ |
15!A:31!B |
G:C |
WC [cWW][XIX] |
10.59 |
52.37; 55.68 |
3.31 |
-11.94 |
0.12 |
18.07 |
rRNA |
2ESJ |
18!A:29!B |
G:C |
WC [cWW][XIX] |
10.69 |
55.18; 54.46 |
0.72 |
-0.29 |
0.03 |
3.12 |
rRNA |
2ESJ |
19!A:28!B |
U:U |
Wb_mo [cWW][XVI] |
10.59 |
52.61; 29.1 |
23.5 |
-2.21 |
0.21 |
11.16 |
rRNA |
2ESJ |
20!A:27!B |
C:G |
WC [cWW][XIX] |
10.59 |
58.06; 50.21 |
7.85 |
-5.66 |
0.13 |
8.93 |
rRNA |
2ESJ |
21!A:26!B |
G:C |
WC [cWW][XIX] |
10.48 |
56.09; 52.16 |
3.93 |
-10.09 |
0.1 |
10.72 |
rRNA |
2ESJ |
22!A:25!B |
C:G |
WC [cWW][XIX] |
10.55 |
57.58; 49.62 |
7.96 |
-14.7 |
0.0 |
13.16 |