Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2F4S
BPC Identified: 17
Ambiguities: 0
rRNA |
2F4S |
1403!A:1498!B |
G:C |
WC [cWW][XIX] |
10.47 |
48.32; 57.67 |
9.34 |
3.76 |
0.23 |
9.82 |
rRNA |
2F4S |
1404!A:1497!B |
C:G |
WC [cWW][XIX] |
10.93 |
48.4; 55.59 |
7.19 |
-3.55 |
0.02 |
6.27 |
rRNA |
2F4S |
1405!A:1496!B |
G:C |
WC [cWW][XIX] |
10.43 |
60.47; 49.02 |
11.45 |
-8.69 |
0.18 |
12.31 |
rRNA |
2F4S |
1407!A:1494!B |
C:G |
WC [cWW][XIX] |
10.51 |
54.25; 54.71 |
0.46 |
2.79 |
0.0 |
2.78 |
rRNA |
2F4S |
1409!A:1491!B |
C:G |
WC [cWW][XIX] |
10.49 |
56.59; 53.03 |
3.55 |
-10.76 |
0.49 |
20.43 |
rRNA |
2F4S |
1410!A:1490!B |
A:U |
WC [cWW][XX] |
10.51 |
53.95; 54.15 |
0.2 |
-12.85 |
0.02 |
16.04 |
rRNA |
2F4S |
1411!A:1489!B |
C:G |
WC [cWW][XIX] |
10.58 |
57.37; 58.55 |
1.18 |
-12.07 |
0.22 |
17.79 |
rRNA |
2F4S |
1412!A:1488!B |
C:G |
WC [cWW][XIX] |
10.55 |
52.7; 56.11 |
3.41 |
-9.6 |
0.42 |
7.81 |
rRNA |
2F4S |
1488!A:1412!B |
G:C |
WC [cWW][XIX] |
10.51 |
56.63; 58.65 |
2.02 |
-6.73 |
0.02 |
10.98 |
rRNA |
2F4S |
1489!A:1411!B |
G:C |
WC [cWW][XIX] |
10.77 |
54.18; 54.3 |
0.12 |
-9.26 |
0.11 |
16.43 |
rRNA |
2F4S |
1490!A:1410!B |
U:A |
WC [cWW][XX] |
10.22 |
60.36; 51.23 |
9.13 |
-13.78 |
0.01 |
16.67 |
rRNA |
2F4S |
1491!A:1409!B |
G:C |
WC [cWW][XIX] |
10.45 |
59.79; 52.98 |
6.81 |
-18.55 |
0.69 |
17.49 |
rRNA |
2F4S |
1494!A:1407!B |
G:C |
WC [cWW][XIX] |
11.21 |
56.4; 41.8 |
14.59 |
1.42 |
0.27 |
10.0 |
rRNA |
2F4S |
1495!A:1406!B |
U:U |
Wb [cWW][XVI] |
9.6 |
35.64; 61.08 |
25.45 |
-6.84 |
0.56 |
23.88 |
rRNA |
2F4S |
1496!A:1405!B |
C:G |
WC [cWW][XIX] |
10.28 |
56.13; 57.7 |
1.57 |
-3.09 |
0.26 |
10.39 |
rRNA |
2F4S |
1497!A:1404!B |
G:C |
WC [cWW][XIX] |
10.39 |
53.44; 57.8 |
4.36 |
1.06 |
0.0 |
6.1 |
rRNA |
2F4S |
1498!A:1403!B |
C:G |
WC [cWW][XIX] |
10.28 |
58.75; 49.98 |
8.77 |
0.27 |
0.09 |
1.91 |