Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2F4T
BPC Identified: 17
Ambiguities: 0
| rRNA |
2F4T |
1403!A:1498!B |
G:C |
WC [cWW][XIX] |
11.05 |
44.35; 51.21 |
6.86 |
1.43 |
0.15 |
5.07 |
| rRNA |
2F4T |
1404!A:1497!B |
C:G |
WC [cWW][XIX] |
10.18 |
57.89; 50.95 |
6.94 |
-13.52 |
0.13 |
23.66 |
| rRNA |
2F4T |
1405!A:1496!B |
G:C |
WC [cWW][XIX] |
10.66 |
56.1; 52.26 |
3.85 |
-6.13 |
0.11 |
12.9 |
| rRNA |
2F4T |
1407!A:1494!B |
C:G |
WC [cWW][XIX] |
10.58 |
49.84; 52.03 |
2.19 |
6.24 |
0.02 |
4.77 |
| rRNA |
2F4T |
1409!A:1491!B |
C:G |
WC [cWW][XIX] |
10.81 |
55.26; 54.47 |
0.79 |
-17.97 |
0.23 |
21.46 |
| rRNA |
2F4T |
1410!A:1490!B |
A:U |
WC [cWW][XX] |
10.41 |
57.84; 52.98 |
4.86 |
-10.58 |
0.1 |
13.6 |
| rRNA |
2F4T |
1411!A:1489!B |
C:G |
WC [cWW][XIX] |
10.57 |
50.6; 58.34 |
7.74 |
-6.59 |
0.15 |
13.63 |
| rRNA |
2F4T |
1412!A:1488!B |
C:G |
WC [cWW][XIX] |
10.72 |
52.59; 51.42 |
1.16 |
-2.87 |
0.13 |
7.08 |
| rRNA |
2F4T |
1488!A:1412!B |
G:C |
WC [cWW][XIX] |
10.94 |
59.4; 50.85 |
8.55 |
-6.91 |
0.04 |
12.55 |
| rRNA |
2F4T |
1489!A:1411!B |
G:C |
WC [cWW][XIX] |
10.85 |
48.58; 51.66 |
3.08 |
-9.28 |
0.35 |
13.48 |
| rRNA |
2F4T |
1490!A:1410!B |
U:A |
WC [cWW][XX] |
10.32 |
63.68; 48.51 |
15.17 |
-10.9 |
0.02 |
14.57 |
| rRNA |
2F4T |
1491!A:1409!B |
G:C |
WC [cWW][XIX] |
10.38 |
57.18; 52.22 |
4.96 |
-5.33 |
0.16 |
7.61 |
| rRNA |
2F4T |
1494!A:1407!B |
G:C |
WC [cWW][XIX] |
10.94 |
59.72; 48.45 |
11.27 |
-14.41 |
0.09 |
15.08 |
| rRNA |
2F4T |
1495!A:1406!B |
U:U |
WC [---][-] |
9.19 |
45.16; 56.99 |
11.83 |
-15.62 |
0.08 |
19.01 |
| rRNA |
2F4T |
1496!A:1405!B |
C:G |
WC [cWW][XIX] |
11.14 |
40.69; 53.14 |
12.45 |
-7.26 |
0.07 |
9.56 |
| rRNA |
2F4T |
1497!A:1404!B |
G:C |
WC [cWW][XIX] |
10.92 |
45.1; 51.62 |
6.53 |
-3.28 |
0.37 |
17.57 |
| rRNA |
2F4T |
1498!A:1403!B |
C:G |
WC [cWW][XIX] |
10.47 |
55.38; 49.7 |
5.68 |
-5.63 |
0.63 |
15.52 |