Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2F4U
BPC Identified: 18
Ambiguities: 0
rRNA |
2F4U |
1403!A:1498!B |
G:C |
WC [cWW][XIX] |
10.91 |
43.67; 52.47 |
8.8 |
-3.58 |
0.31 |
10.2 |
rRNA |
2F4U |
1404!A:1497!B |
C:G |
WC [cWW][XIX] |
10.82 |
48.94; 55.99 |
7.04 |
-9.22 |
0.07 |
11.28 |
rRNA |
2F4U |
1405!A:1496!B |
G:C |
WC [cWW][XIX] |
10.47 |
55.08; 55.55 |
0.47 |
-7.1 |
0.14 |
6.03 |
rRNA |
2F4U |
1406!A:1407A |
U:C |
pS(sp:O2*-O1P) [---][-] |
9.38 |
133.98; 90.54 |
43.43 |
114.25 |
0.13 |
89.91 |
rRNA |
2F4U |
1407!A:1494!B |
C:G |
WC [cWW][XIX] |
10.47 |
55.67; 50.36 |
5.31 |
8.38 |
0.09 |
6.41 |
rRNA |
2F4U |
1409!A:1491!B |
C:G |
WC [cWW][XIX] |
10.69 |
50.2; 58.23 |
8.04 |
-14.44 |
0.26 |
21.05 |
rRNA |
2F4U |
1410!A:1490!B |
A:U |
WC [cWW][XX] |
10.63 |
53.58; 56.46 |
2.88 |
-9.73 |
0.11 |
16.48 |
rRNA |
2F4U |
1411!A:1489!B |
C:G |
WC [cWW][XIX] |
10.51 |
55.61; 57.02 |
1.41 |
-11.3 |
0.04 |
14.06 |
rRNA |
2F4U |
1412!A:1488!B |
C:G |
WC [cWW][XIX] |
10.64 |
51.87; 58.1 |
6.23 |
-8.33 |
0.04 |
11.51 |
rRNA |
2F4U |
1488!A:1412!B |
G:C |
WC [cWW][XIX] |
10.5 |
57.4; 53.78 |
3.62 |
-8.89 |
0.12 |
12.02 |
rRNA |
2F4U |
1489!A:1411!B |
G:C |
WC [cWW][XIX] |
10.46 |
53.94; 56.87 |
2.94 |
-5.91 |
0.06 |
16.54 |
rRNA |
2F4U |
1490!A:1410!B |
U:A |
WC [cWW][XX] |
10.44 |
59.16; 52.4 |
6.76 |
-10.82 |
0.31 |
8.06 |
rRNA |
2F4U |
1491!A:1409!B |
G:C |
WC [cWW][XIX] |
10.84 |
51.79; 48.66 |
3.13 |
-11.04 |
0.27 |
16.04 |
rRNA |
2F4U |
1493!A:1408!B |
A:A |
H_1 [---][-] |
11.23 |
33.78; 68.2 |
34.42 |
28.23 |
0.31 |
37.4 |
rRNA |
2F4U |
1494!A:1407!B |
G:C |
WC [cWW][XIX] |
10.68 |
58.54; 46.45 |
12.09 |
-0.15 |
0.91 |
21.32 |
rRNA |
2F4U |
1496!A:1405!B |
C:G |
WC [cWW][XIX] |
10.39 |
54.8; 53.46 |
1.35 |
-8.86 |
0.24 |
15.36 |
rRNA |
2F4U |
1497!A:1404!B |
G:C |
WC [cWW][XIX] |
10.33 |
66.22; 59.21 |
7.01 |
-1.41 |
0.03 |
4.84 |
rRNA |
2F4U |
1498!A:1403!B |
C:G |
WC [cWW][XIX] |
10.88 |
57.91; 49.65 |
8.26 |
-3.11 |
0.03 |
2.63 |