Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2F8K
BPC Identified: 9
Ambiguities: 0
| mRNA |
2F8K |
0!B:3!B |
U:U |
S(bp:N3-O2P) [---][-] |
8.94 |
71.41; 28.25 |
43.16 |
-144.29 |
0.14 |
31.83 |
| mRNA |
2F8K |
0!B:2!B |
U:A |
S(sb:O2*-N7) [---][-] |
6.81 |
73.9; 40.49 |
33.41 |
-158.58 |
0.14 |
38.52 |
| mRNA |
2F8K |
1!B:15!B |
A:U |
WC [cWW][XX] |
10.47 |
56.83; 56.06 |
0.77 |
-3.11 |
0.12 |
6.46 |
| mRNA |
2F8K |
2!B:14!B |
A:U |
WC [cWW][XX] |
10.34 |
57.99; 56.02 |
1.97 |
-10.75 |
0.12 |
13.22 |
| mRNA |
2F8K |
3!B:13!B |
U:A |
WC [cWW][XX] |
10.34 |
55.32; 58.08 |
2.76 |
-11.62 |
0.04 |
20.36 |
| mRNA |
2F8K |
4!B:12!B |
C:G |
WC [cWW][XIX] |
10.54 |
54.56; 55.14 |
0.58 |
-8.22 |
0.12 |
16.54 |
| mRNA |
2F8K |
5!B:11!B |
U:A |
WC [cWW][XX] |
10.67 |
53.8; 54.22 |
0.42 |
-3.91 |
0.06 |
7.41 |
| mRNA |
2F8K |
6!B:11!B |
U:A |
WC [cWW][XX] |
9.49 |
55.5; 68.46 |
12.95 |
-8.95 |
2.57 |
17.21 |
| mRNA |
2F8K |
6!B:9!B |
U:A |
WC [cWW][XX] |
10.36 |
55.49; 56.55 |
1.05 |
10.72 |
0.55 |
19.32 |