Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2F8T BPC Identified: 23 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
siRNA 2F8T 2!C:23!D G:C Wb [---][-] 9.93 47.22; 78.16 30.94 -8.81 0.41 42.55
siRNA 2F8T 3!C:22!D A:U WC [cWW][XX] 10.99 53.99; 51.69 2.3 -4.36 0.07 22.09
siRNA 2F8T 4!C:21!D C:G WC [cWW][XIX] 10.53 59.77; 51.52 8.26 -0.03 0.41 12.04
siRNA 2F8T 5!C:20!D A:U WC [cWW][XX] 10.5 46.81; 61.41 14.6 -17.46 0.43 26.78
siRNA 2F8T 6!C:19!D G:C Wb* [---][-] 11.75 54.89; 37.19 17.71 -5.54 0.34 25.3
siRNA 2F8T 7!C:18!D C:G WC [cWW][XIX] 10.44 54.3; 60.42 6.12 -7.87 0.8 24.28
siRNA 2F8T 8!C:17!D A:U WC [cWW][XX] 10.18 53.62; 60.01 6.39 -4.57 0.81 20.45
siRNA 2F8T 9!C:16!D U:A Wb* [---][-] 10.35 47.7; 64.47 16.77 -0.08 0.21 6.03
siRNA 2F8T 10!C:15!D G:C WC [cWW][XIX] 10.94 53.72; 56.59 2.87 -5.41 0.01 25.9
siRNA 2F8T 11!C:14!D C:G WC [cWW][XIX] 10.95 50.27; 53.77 3.51 -1.99 0.19 14.97
siRNA 2F8T 12!C:13!D A:U WC [cWW][XX] 10.06 63.57; 59.8 3.77 -1.59 0.1 9.39
siRNA 2F8T 13!C:12!D U:A WC [cWW][XX] 10.41 53.8; 56.0 2.2 -16.96 0.09 23.52
siRNA 2F8T 14!C:11!D G:C WC [cWW][XIX] 10.47 57.79; 57.8 0.01 -7.98 0.0 9.99
siRNA 2F8T 15!C:10!D C:G WC [cWW][XIX] 10.45 58.74; 60.97 2.24 -8.98 0.25 14.85
siRNA 2F8T 16!C:9!D A:U WC [cWW][XX] 10.69 57.07; 54.45 2.62 -8.6 0.01 16.15
siRNA 2F8T 17!C:8!D U:A WC [cWW][XX] 10.5 53.92; 61.27 7.35 -6.47 0.18 8.66
siRNA 2F8T 18!C:7!D G:C WC [cWW][XIX] 10.48 50.78; 60.47 9.69 -10.1 0.23 13.89
siRNA 2F8T 19!C:6!D C:G WC [cWW][XIX] 10.51 51.64; 55.49 3.85 -10.99 0.19 16.49
siRNA 2F8T 20!C:5!D U:A WC [cWW][XX] 10.55 54.66; 46.62 8.04 -6.8 0.45 3.25
siRNA 2F8T 21!C:4!D G:C Wb [---][-] 10.55 47.86; 60.99 13.13 -13.95 0.29 21.18
siRNA 2F8T 22!C:3!D U:A WC [cWW][XX] 10.13 56.94; 60.33 3.39 -18.46 0.09 22.59
siRNA 2F8T 23!C:2!D C:G WC [cWW][XIX] 11.09 48.65; 48.62 0.02 -11.6 0.24 14.87
siRNA 2F8T 24!C:1!D U:A WC [cWW][XX] 10.9 54.74; 45.9 8.83 -8.07 1.06 5.27