Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2FCY
BPC Identified: 20
Ambiguities: 0
vRNA |
2FCY |
1!A:23!A |
C:G |
WC [cWW][XIX] |
10.64 |
53.93; 54.49 |
0.57 |
-12.4 |
0.07 |
19.17 |
vRNA |
2FCY |
2!A:22!A |
U:A |
WC [cWW][XX] |
10.34 |
54.85; 54.29 |
0.55 |
-12.4 |
0.05 |
17.55 |
vRNA |
2FCY |
3!A:21!A |
U:A |
WC [cWW][XX] |
10.32 |
58.79; 57.09 |
1.69 |
-16.64 |
0.17 |
20.4 |
vRNA |
2FCY |
4!A:20!A |
G:C |
WC [cWW][XIX] |
10.71 |
54.55; 52.82 |
1.73 |
-12.34 |
0.08 |
18.8 |
vRNA |
2FCY |
5!A:19!A |
C:G |
WC [cWW][XIX] |
10.57 |
53.45; 52.51 |
0.94 |
-13.57 |
0.07 |
18.84 |
vRNA |
2FCY |
6!A:18!A |
U:A |
WC [cWW][XX] |
10.43 |
53.85; 56.46 |
2.62 |
-14.78 |
0.19 |
14.6 |
vRNA |
2FCY |
7!A:17!A |
G:C |
WC [cWW][XIX] |
10.47 |
53.91; 53.72 |
0.19 |
-17.12 |
0.33 |
23.46 |
vRNA |
2FCY |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.65 |
51.93; 55.67 |
3.74 |
-1.87 |
0.03 |
5.34 |
vRNA |
2FCY |
11!A:14!B |
U:A |
WC [cWW][XX] |
10.63 |
53.2; 54.94 |
1.74 |
-5.81 |
0.18 |
8.78 |
vRNA |
2FCY |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.53 |
55.86; 58.02 |
2.16 |
-7.97 |
0.2 |
9.89 |
vRNA |
2FCY |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.56 |
56.57; 56.02 |
0.56 |
-6.1 |
0.07 |
7.29 |
vRNA |
2FCY |
14!A:11!B |
A:U |
WC [cWW][XX] |
10.45 |
58.21; 57.47 |
0.73 |
-2.84 |
0.16 |
5.5 |
vRNA |
2FCY |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.73 |
54.37; 52.52 |
1.86 |
-1.97 |
0.02 |
5.05 |
vRNA |
2FCY |
1!B:23!B |
C:G |
WC [cWW][XIX] |
10.67 |
51.88; 53.92 |
2.04 |
-11.88 |
0.56 |
20.78 |
vRNA |
2FCY |
2!B:22!B |
U:A |
WC [cWW][XX] |
10.5 |
54.8; 57.56 |
2.76 |
-9.79 |
0.21 |
16.29 |
vRNA |
2FCY |
3!B:21!B |
U:A |
WC [cWW][XX] |
10.49 |
58.01; 52.14 |
5.87 |
-13.87 |
0.08 |
13.39 |
vRNA |
2FCY |
4!B:20!B |
G:C |
WC [cWW][XIX] |
10.71 |
54.79; 53.66 |
1.13 |
-12.05 |
0.2 |
13.4 |
vRNA |
2FCY |
5!B:19!B |
C:G |
WC [cWW][XIX] |
10.54 |
53.62; 51.8 |
1.82 |
-12.63 |
0.1 |
16.96 |
vRNA |
2FCY |
6!B:18!B |
U:A |
WC [cWW][XX] |
10.51 |
54.53; 57.34 |
2.8 |
-9.81 |
0.15 |
11.99 |
vRNA |
2FCY |
7!B:17!B |
G:C |
WC [cWW][XIX] |
10.57 |
55.7; 52.12 |
3.58 |
-17.21 |
0.4 |
27.14 |