Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2FCZ
BPC Identified: 40
Ambiguities: 0
vRNA |
2FCZ |
1!A:23!A |
C:G |
WC [cWW][XIX] |
10.57 |
52.88; 53.88 |
1.0 |
-18.04 |
0.45 |
26.57 |
vRNA |
2FCZ |
2!A:22!A |
U:A |
WC [cWW][XX] |
10.41 |
56.12; 58.0 |
1.88 |
-12.7 |
0.03 |
18.12 |
vRNA |
2FCZ |
3!A:21!A |
U:A |
WC [cWW][XX] |
10.51 |
56.9; 51.41 |
5.49 |
-8.88 |
0.09 |
14.05 |
vRNA |
2FCZ |
4!A:20!A |
G:C |
WC [cWW][XIX] |
10.26 |
55.08; 57.09 |
2.01 |
-7.95 |
0.28 |
13.3 |
vRNA |
2FCZ |
5!A:19!A |
C:G |
WC [cWW][XIX] |
10.68 |
51.4; 51.64 |
0.24 |
-9.64 |
0.0 |
14.26 |
vRNA |
2FCZ |
6!A:18!A |
U:A |
WC [cWW][XX] |
10.72 |
48.45; 55.38 |
6.92 |
-10.68 |
0.15 |
13.23 |
vRNA |
2FCZ |
7!A:17!A |
G:C |
WC [cWW][XIX] |
10.48 |
52.72; 53.94 |
1.22 |
-16.94 |
0.43 |
27.31 |
vRNA |
2FCZ |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.58 |
53.47; 56.01 |
2.54 |
-0.91 |
0.23 |
9.42 |
vRNA |
2FCZ |
11!A:14!B |
U:A |
WC [cWW][XX] |
10.33 |
56.76; 57.27 |
0.51 |
-1.7 |
0.08 |
6.58 |
vRNA |
2FCZ |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.68 |
54.41; 52.56 |
1.85 |
-8.42 |
0.14 |
10.52 |
vRNA |
2FCZ |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.68 |
54.52; 54.9 |
0.38 |
-11.87 |
0.09 |
13.69 |
vRNA |
2FCZ |
14!A:11!B |
A:U |
WC [cWW][XX] |
10.59 |
55.49; 53.03 |
2.46 |
-3.45 |
0.1 |
7.98 |
vRNA |
2FCZ |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.67 |
57.33; 51.62 |
5.71 |
-2.84 |
0.02 |
5.07 |
vRNA |
2FCZ |
1!B:23!B |
C:G |
WC [cWW][XIX] |
10.63 |
56.5; 51.48 |
5.02 |
-11.5 |
0.12 |
17.77 |
vRNA |
2FCZ |
2!B:22!B |
U:A |
WC [cWW][XX] |
10.31 |
54.98; 54.82 |
0.15 |
-11.4 |
0.23 |
17.61 |
vRNA |
2FCZ |
3!B:21!B |
U:A |
WC [cWW][XX] |
10.52 |
56.8; 49.26 |
7.54 |
-15.92 |
0.09 |
20.03 |
vRNA |
2FCZ |
4!B:20!B |
G:C |
WC [cWW][XIX] |
10.79 |
52.23; 53.17 |
0.93 |
-12.35 |
0.08 |
14.08 |
vRNA |
2FCZ |
5!B:19!B |
C:G |
WC [cWW][XIX] |
10.57 |
54.31; 53.15 |
1.16 |
-15.71 |
0.09 |
16.17 |
vRNA |
2FCZ |
6!B:18!B |
U:A |
WC [cWW][XX] |
10.4 |
57.51; 54.12 |
3.39 |
-13.67 |
0.21 |
14.72 |
vRNA |
2FCZ |
7!B:17!B |
G:C |
WC [cWW][XIX] |
10.6 |
52.22; 57.5 |
5.28 |
-15.8 |
0.37 |
24.06 |
vRNA |
2FCZ |
1!C:23!C |
C:G |
WC [cWW][XIX] |
10.6 |
52.93; 54.25 |
1.31 |
-13.52 |
0.1 |
18.86 |
vRNA |
2FCZ |
2!C:22!C |
U:A |
WC [cWW][XX] |
10.61 |
53.51; 54.04 |
0.53 |
-14.41 |
0.08 |
13.62 |
vRNA |
2FCZ |
3!C:21!C |
U:A |
WC [cWW][XX] |
10.62 |
54.63; 52.86 |
1.77 |
-14.46 |
0.22 |
15.13 |
vRNA |
2FCZ |
4!C:20!C |
G:C |
WC [cWW][XIX] |
10.5 |
52.8; 57.68 |
4.88 |
-9.14 |
0.17 |
12.2 |
vRNA |
2FCZ |
5!C:19!C |
C:G |
WC [cWW][XIX] |
10.7 |
51.31; 53.87 |
2.56 |
-8.27 |
0.02 |
10.74 |
vRNA |
2FCZ |
6!C:18!C |
U:A |
WC [cWW][XX] |
10.27 |
54.5; 56.3 |
1.8 |
-11.81 |
0.34 |
9.57 |
vRNA |
2FCZ |
7!C:17!C |
G:C |
WC [cWW][XIX] |
10.52 |
52.14; 54.84 |
2.7 |
-17.96 |
0.28 |
24.25 |
vRNA |
2FCZ |
10!C:15!D |
G:C |
WC [cWW][XIX] |
10.5 |
51.87; 55.27 |
3.4 |
0.94 |
0.07 |
4.01 |
vRNA |
2FCZ |
11!C:14!D |
U:A |
WC [cWW][XX] |
10.38 |
54.5; 56.51 |
2.01 |
-7.69 |
0.04 |
11.88 |
vRNA |
2FCZ |
12!C:13!D |
G:C |
WC [cWW][XIX] |
10.52 |
56.85; 54.43 |
2.42 |
-8.85 |
0.29 |
18.55 |
vRNA |
2FCZ |
13!C:12!D |
C:G |
WC [cWW][XIX] |
10.42 |
57.96; 54.83 |
3.13 |
-9.05 |
0.18 |
16.36 |
vRNA |
2FCZ |
14!C:11!D |
A:U |
WC [cWW][XX] |
10.44 |
56.92; 55.03 |
1.89 |
-7.76 |
0.01 |
10.82 |
vRNA |
2FCZ |
15!C:10!D |
C:G |
WC [cWW][XIX] |
10.59 |
56.66; 51.14 |
5.52 |
1.39 |
0.14 |
5.81 |
vRNA |
2FCZ |
1!D:23!D |
C:G |
WC [cWW][XIX] |
10.72 |
52.53; 55.14 |
2.61 |
-13.22 |
0.11 |
16.76 |
vRNA |
2FCZ |
2!D:22!D |
U:A |
WC [cWW][XX] |
10.16 |
55.32; 60.21 |
4.9 |
-5.33 |
0.15 |
11.16 |
vRNA |
2FCZ |
3!D:21!D |
U:A |
WC [cWW][XX] |
10.41 |
62.4; 50.7 |
11.71 |
-6.53 |
0.09 |
13.94 |
vRNA |
2FCZ |
4!D:20!D |
G:C |
WC [cWW][XIX] |
10.39 |
53.79; 55.49 |
1.7 |
-8.92 |
0.23 |
15.43 |
vRNA |
2FCZ |
5!D:19!D |
C:G |
WC [cWW][XIX] |
10.37 |
56.71; 51.8 |
4.91 |
-9.63 |
0.01 |
11.49 |
vRNA |
2FCZ |
6!D:18!D |
U:A |
WC [cWW][XX] |
10.37 |
55.77; 54.4 |
1.37 |
-7.08 |
0.16 |
10.19 |
vRNA |
2FCZ |
7!D:17!D |
G:C |
WC [cWW][XIX] |
10.38 |
56.45; 55.65 |
0.8 |
-12.47 |
0.1 |
29.9 |