Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2FK6
BPC Identified: 25
Ambiguities: 0
tRNA |
2FK6 |
1!R:72!R |
G:C |
WC [cWW][XIX] |
10.71 |
50.11; 57.18 |
7.07 |
11.11 |
0.49 |
17.0 |
tRNA |
2FK6 |
2!R:71!R |
C:G |
WC [cWW][XIX] |
10.05 |
58.14; 59.5 |
1.35 |
4.79 |
0.9 |
17.19 |
tRNA |
2FK6 |
3!R:70!R |
U:A |
WC [cWW][XX] |
10.32 |
55.11; 59.88 |
4.77 |
1.55 |
0.59 |
16.82 |
tRNA |
2FK6 |
4!R:69!R |
U:A |
WC [cWW][XX] |
10.58 |
54.63; 56.86 |
2.23 |
7.08 |
0.03 |
7.33 |
tRNA |
2FK6 |
5!R:68!R |
C:G |
WC [cWW][XIX] |
10.74 |
54.14; 56.61 |
2.48 |
9.48 |
0.26 |
3.09 |
tRNA |
2FK6 |
6!R:67!R |
C:G |
WC [cWW][XIX] |
10.73 |
52.23; 53.13 |
0.9 |
4.05 |
0.22 |
7.08 |
tRNA |
2FK6 |
7!R:66!R |
A:U |
WC [cWW][XX] |
10.41 |
57.94; 55.8 |
2.14 |
-3.47 |
0.2 |
6.45 |
tRNA |
2FK6 |
8!R:14!R |
U:A |
rH_3 [---][-] |
9.03 |
46.83; 33.13 |
13.7 |
178.33 |
0.09 |
5.39 |
tRNA |
2FK6 |
9!R:23!R |
A:A |
rS* [tHH][-] |
12.72 |
18.45; 14.01 |
4.44 |
-19.94 |
0.23 |
14.43 |
tRNA |
2FK6 |
10!R:25!R |
G:C |
WC [cWW][XIX] |
10.11 |
60.72; 59.47 |
1.25 |
-6.39 |
1.22 |
13.22 |
tRNA |
2FK6 |
11!R:24!R |
C:G |
WC [cWW][XIX] |
10.53 |
43.89; 49.7 |
5.81 |
-24.49 |
1.09 |
20.3 |
tRNA |
2FK6 |
12!R:23!R |
U:A |
WC [cWW][XX] |
10.66 |
52.39; 52.06 |
0.33 |
-17.53 |
0.12 |
24.23 |
tRNA |
2FK6 |
13!R:22!R |
C:G |
WC [cWW][XIX] |
10.55 |
60.3; 55.37 |
4.93 |
-3.04 |
0.47 |
8.54 |
tRNA |
2FK6 |
15!R:48!R |
G:C |
rWb [tWW][XXII] |
10.4 |
37.47; 53.54 |
16.07 |
167.38 |
0.46 |
18.93 |
tRNA |
2FK6 |
18!R:60!R |
G:C |
pfS*(bs:N3-O2*) [---][-] |
6.4 |
121.5; 42.5 |
79.0 |
125.6 |
2.53 |
80.27 |
tRNA |
2FK6 |
18!R:55!R |
G:U |
fS_1 [tSW][-] |
9.35 |
22.3; 106.53 |
84.23 |
-152.5 |
0.47 |
20.86 |
tRNA |
2FK6 |
19!R:56!R |
G:C |
WC [cWW][XIX] |
10.33 |
59.98; 56.67 |
3.31 |
-20.58 |
0.09 |
23.58 |
tRNA |
2FK6 |
22!R:46!R |
G:G |
rH_1 [tWH][VII] |
10.83 |
39.08; 35.93 |
3.15 |
176.69 |
0.55 |
12.34 |
tRNA |
2FK6 |
49!R:65!R |
A:U |
WC [cWW][XX] |
10.3 |
56.77; 59.87 |
3.1 |
4.55 |
0.21 |
7.2 |
tRNA |
2FK6 |
50!R:64!R |
G:C |
WC [cWW][XIX] |
10.22 |
56.31; 61.27 |
4.96 |
-2.76 |
0.08 |
27.57 |
tRNA |
2FK6 |
51!R:63!R |
C:G |
WC [cWW][XIX] |
10.78 |
55.77; 52.57 |
3.2 |
7.05 |
0.11 |
2.12 |
tRNA |
2FK6 |
52!R:62!R |
G:C |
WC [cWW][XIX] |
10.5 |
59.08; 57.42 |
1.65 |
9.15 |
0.17 |
5.91 |
tRNA |
2FK6 |
53!R:61!R |
G:C |
WC [cWW][XIX] |
10.58 |
54.87; 55.8 |
0.94 |
-3.66 |
0.4 |
14.67 |
tRNA |
2FK6 |
54!R:58!R |
U:A |
rH_1 [tWH][XXIV] |
9.88 |
31.95; 15.15 |
16.81 |
170.25 |
0.47 |
13.82 |
tRNA |
2FK6 |
55!R:57!R |
U:G |
S(sb:O2*-N7)_1 [---][-] |
6.56 |
79.7; 45.29 |
34.4 |
-169.8 |
2.66 |
28.14 |