Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2FMT BPC Identified: 61 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2FMT 2!C:71!C G:C WC [cWW][XIX] 10.7 52.72; 53.21 0.49 2.34 0.25 11.9
tRNA 2FMT 3!C:70!C C:G WC [cWW][XIX] 10.67 50.71; 56.41 5.7 7.79 0.05 20.37
tRNA 2FMT 4!C:69!C G:C WC [cWW][XIX] 10.3 60.02; 60.08 0.06 10.69 0.05 10.4
tRNA 2FMT 5!C:68!C G:C WC [cWW][XIX] 10.58 56.7; 61.53 4.83 8.3 0.23 11.4
tRNA 2FMT 6!C:67!C G:C WC [cWW][XIX] 10.5 58.11; 59.2 1.08 4.07 0.42 16.47
tRNA 2FMT 7!C:66!C G:C WC [cWW][XIX] 11.06 61.27; 52.75 8.52 1.91 0.41 15.21
tRNA 2FMT 8!C:14!C U:A rH_4SU [---][-] 9.99 30.11; 18.08 12.04 156.81 0.54 18.96
tRNA 2FMT 10!C:45!C G:G pS_1 [cSH][-] 8.57 47.03; 117.59 70.56 1.86 0.05 11.6
tRNA 2FMT 10!C:25!C G:C WC [cWW][XIX] 10.63 50.83; 59.38 8.54 1.77 0.06 1.8
tRNA 2FMT 11!C:24!C A:U WC [cWW][XX] 10.37 53.67; 59.48 5.81 -1.41 0.25 4.99
tRNA 2FMT 12!C:23!C G:C WC [cWW][XIX] 10.51 54.46; 56.95 2.5 -4.99 0.09 12.87
tRNA 2FMT 13!C:22!C C:G WC [cWW][XIX] 10.47 59.55; 47.31 12.24 -0.7 0.01 10.39
tRNA 2FMT 15!C:48!C G:C rWb [tWW][XXII] 10.79 35.43; 50.58 15.15 -173.26 0.15 5.04
tRNA 2FMT 19!C:56!C* G:C Wb* [---][-]; Wb* [---][-] 10.76 68.41; 52.92 15.49 -21.61 1.53 52.24
tRNA 2FMT 26!C:44!C G:A WC [cWW][VIII] 12.78 46.16; 47.69 1.52 -10.83 0.32 21.88
tRNA 2FMT 27!C:43!C U:A WC [cWW][XX] 10.64 51.93; 51.69 0.24 -12.07 0.43 21.42
tRNA 2FMT 28!C:42!C C:G WC [cWW][XIX] 10.62 55.92; 53.47 2.45 -6.43 0.02 26.44
tRNA 2FMT 29!C:41!C G:C WC [cWW][XIX] 10.7 57.13; 54.98 2.16 -4.38 0.06 8.05
tRNA 2FMT 30!C:40!C G:C WC [cWW][XIX] 10.57 53.1; 57.13 4.03 -7.11 0.11 11.45
tRNA 2FMT 31!C:39!C G:C WC [cWW][XIX] 10.34 52.79; 54.31 1.52 -3.42 0.69 19.51
tRNA 2FMT 32!C:38!C C:A WC [---][-] 11.47 57.07; 48.24 8.82 16.27 0.11 26.28
tRNA 2FMT 33!C:36!C U:U S(bp:N3-O2P) [---][-] 9.07 73.26; 28.24 45.02 -131.27 0.78 33.53
tRNA 2FMT 49!C:65!C G:C WC [cWW][XIX] 10.91 57.01; 52.59 4.42 1.12 0.05 6.97
tRNA 2FMT 50!C:64!C U:G Wb [cWW][XXVIII] 10.23 68.84; 47.86 20.98 1.72 0.58 6.71
tRNA 2FMT 51!C:63!C C:G WC [cWW][XIX] 10.41 57.72; 55.5 2.22 5.1 0.33 6.07
tRNA 2FMT 52!C:62!C G:C WC [cWW][XIX] 10.97 59.3; 54.42 4.88 2.83 0.24 5.8
tRNA 2FMT 53!C:61!C G:C WC [cWW][XIX] 11.09 52.12; 53.25 1.13 1.69 0.0 4.09
tRNA 2FMT 54!C:58!C U:A rH_1 [tWH][XXIV] 10.33 23.41; 17.09 6.32 -152.66 0.0 12.09
tRNA 2FMT 55!C:57!C U:A S_PSU(sb:O2*-N7) [---][-] 6.56 97.22; 46.59 50.63 -174.35 2.39 33.03
tRNA 2FMT 2!D:71!D G:C WC [cWW][XIX] 10.39 54.18; 55.03 0.85 -1.85 0.61 19.46
tRNA 2FMT 3!D:70!D C:G WC [cWW][XIX] 10.65 52.21; 56.66 4.45 9.59 0.13 19.73
tRNA 2FMT 4!D:69!D G:C WC [cWW][XIX] 10.44 57.18; 61.55 4.37 12.3 0.21 8.84
tRNA 2FMT 5!D:68!D G:C WC [cWW][XIX] 10.63 56.63; 60.12 3.48 4.32 0.02 10.31
tRNA 2FMT 6!D:67!D G:C WC [cWW][XIX] 10.49 60.49; 60.0 0.49 5.88 0.18 9.59
tRNA 2FMT 7!D:66!D G:C WC [cWW][XIX] 10.94 62.12; 51.55 10.57 2.24 0.3 16.34
tRNA 2FMT 8!D:14!D U:A rH_4SU [---][-] 10.04 29.27; 17.97 11.3 161.76 0.96 24.78
tRNA 2FMT 10!D:45!D G:G pS_2 [---][-] 8.85 45.53; 114.01 68.48 0.92 0.45 9.47
tRNA 2FMT 10!D:25!D G:C WC [cWW][XIX] 10.64 51.47; 58.36 6.89 -0.97 0.03 4.98
tRNA 2FMT 11!D:24!D A:U WC [cWW][XX] 10.31 55.39; 57.42 2.03 -0.67 0.14 4.05
tRNA 2FMT 12!D:23!D G:C WC [cWW][XIX] 10.52 54.47; 56.53 2.05 -6.54 0.05 8.07
tRNA 2FMT 13!D:22!D C:G Wb [---][-] 10.44 61.76; 46.96 14.8 1.09 0.06 10.32
tRNA 2FMT 15!D:48!D G:C rWb [tWW][XXII] 10.92 34.53; 50.36 15.83 -170.08 0.03 7.27
tRNA 2FMT 18!D:55!D G:U fS_PSU [---][-] 9.62 40.36; 121.75 81.39 -125.39 1.34 37.8
tRNA 2FMT 19!D:56!D G:C Wb* [---][-] 11.01 65.93; 49.58 16.35 -15.6 2.14 55.62
tRNA 2FMT 26!D:44!D G:A WC [cWW][VIII] 12.63 47.23; 49.1 1.87 -13.1 0.17 26.29
tRNA 2FMT 27!D:43!D U:A WC [cWW][XX] 10.64 51.02; 54.31 3.28 -13.15 0.11 20.85
tRNA 2FMT 28!D:42!D C:G WC [cWW][XIX] 10.55 57.95; 56.3 1.65 -5.78 0.16 24.45
tRNA 2FMT 29!D:41!D G:C WC [cWW][XIX] 10.52 57.56; 56.04 1.52 -3.71 0.02 10.72
tRNA 2FMT 30!D:40!D G:C WC [cWW][XIX] 10.53 54.71; 58.44 3.73 -1.69 0.16 5.69
tRNA 2FMT 31!D:39!D G:C WC [cWW][XIX] 10.57 54.94; 56.26 1.32 0.43 0.25 22.15
tRNA 2FMT 32!D:38!D C:A Wb_mo [cWW][-] 11.76 53.27; 41.47 11.81 -1.88 1.16 23.75
tRNA 2FMT 33!D:36!D U:U S(bp:N3-O2P) [---][-] 8.53 81.73; 25.48 56.25 -155.61 0.65 33.26
tRNA 2FMT 33!D:35!D U:A S(sb:O2*-N7) [---][-] 6.42 80.86; 41.66 39.2 -172.47 0.24 36.77
tRNA 2FMT 49!D:65!D G:C WC [cWW][XIX] 10.99 59.43; 48.39 11.05 2.68 0.04 11.35
tRNA 2FMT 50!D:64!D U:G Wb [cWW][XXVIII] 10.2 68.88; 46.98 21.89 2.46 0.52 2.82
tRNA 2FMT 51!D:63!D C:G WC [cWW][XIX] 10.61 60.61; 55.0 5.61 7.98 0.56 2.38
tRNA 2FMT 52!D:62!D G:C WC [cWW][XIX] 11.07 57.74; 52.86 4.88 -0.46 0.28 9.83
tRNA 2FMT 53!D:61!D G:C WC [cWW][XIX] 11.34 53.48; 52.5 0.98 1.29 0.05 4.06
tRNA 2FMT 54!D:58!D U:A rH_1 [tWH][XXIV] 10.56 23.5; 16.32 7.17 -141.1 0.2 15.93
tRNA 2FMT 55!D:57!D U:A S_PSU(sb:O2*-N7) [---][-] 6.59 100.59; 43.26 57.33 -167.65 1.41 38.65
tRNA 2FMT 58!D:59!D A:A rpS(sp:O2*-O2P) [---][-] 7.46 128.34; 75.57 52.77 -117.21 2.48 72.42