Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2FQN
BPC Identified: 19
Ambiguities: 0
rRNA |
2FQN |
3!A:46!B |
G:C |
WC [cWW][XIX] |
10.65 |
53.3; 56.95 |
3.64 |
7.66 |
0.18 |
11.09 |
rRNA |
2FQN |
4!A:45!B |
C:G |
WC [cWW][XIX] |
10.61 |
56.02; 56.57 |
0.55 |
-2.96 |
0.27 |
12.67 |
rRNA |
2FQN |
5!A:44!B |
G:C |
WC [cWW][XIX] |
10.67 |
56.35; 55.49 |
0.87 |
-2.27 |
0.07 |
15.59 |
rRNA |
2FQN |
6!A:43!B |
U:U |
Wb [cWW][XVI] |
9.17 |
68.64; 40.72 |
27.93 |
-11.57 |
0.16 |
17.46 |
rRNA |
2FQN |
7!A:42!B |
C:G |
WC [cWW][XIX] |
10.39 |
59.48; 59.11 |
0.37 |
-0.3 |
0.02 |
6.12 |
rRNA |
2FQN |
9!A:39!B |
C:A |
Wb* [cWW][-] |
11.41 |
42.27; 69.7 |
27.42 |
-6.95 |
0.55 |
20.22 |
rRNA |
2FQN |
10!A:38!B |
U:A |
WC [cWW][XX] |
10.78 |
51.5; 54.94 |
3.45 |
-13.4 |
0.21 |
16.58 |
rRNA |
2FQN |
11!A:37!B |
C:G |
WC [cWW][XIX] |
10.51 |
55.64; 55.73 |
0.09 |
-6.09 |
0.41 |
22.3 |
rRNA |
2FQN |
12!A:36!B |
C:G |
WC [cWW][XIX] |
10.66 |
53.68; 53.26 |
0.42 |
-1.38 |
0.09 |
9.82 |
rRNA |
2FQN |
13!A:35!B |
G:C |
WC [cWW][XIX] |
10.63 |
55.24; 53.72 |
1.52 |
-4.84 |
0.17 |
10.73 |
rRNA |
2FQN |
14!A:34!B |
G:C |
WC [cWW][XIX] |
10.61 |
53.46; 54.47 |
1.01 |
-8.9 |
0.34 |
17.59 |
rRNA |
2FQN |
15!A:33!B |
A:U |
WC [cWW][XX] |
10.98 |
49.91; 50.54 |
0.63 |
-9.53 |
0.35 |
16.89 |
rRNA |
2FQN |
17!A:32!B |
A:C |
pfS* [cWS][-] |
8.1 |
132.96; 36.15 |
96.8 |
-14.3 |
0.25 |
20.65 |
rRNA |
2FQN |
18!A:31!B |
A:G |
S [tSH][XI] |
10.61 |
18.67; 74.25 |
55.58 |
153.56 |
1.58 |
28.69 |
rRNA |
2FQN |
19!A:30!B |
G:C |
WC [cWW][XIX] |
10.65 |
54.48; 54.94 |
0.45 |
-4.2 |
0.07 |
8.17 |
rRNA |
2FQN |
20!A:29B |
U:U |
Wb [cWW][XVI] |
9.08 |
42.9; 72.12 |
29.22 |
-10.34 |
0.31 |
13.31 |
rRNA |
2FQN |
21!A:28!B |
C:G |
WC [cWW][XIX] |
10.48 |
56.63; 57.48 |
0.85 |
-7.71 |
0.6 |
19.55 |
rRNA |
2FQN |
22!A:27!B |
G:C |
WC [cWW][XIX] |
10.83 |
52.85; 52.75 |
0.1 |
5.17 |
0.2 |
13.04 |
rRNA |
2FQN |
23!A:26!B |
C:G |
WC [cWW][XIX] |
10.71 |
54.62; 54.66 |
0.04 |
5.14 |
0.09 |
5.1 |