Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2G5K
BPC Identified: 18
Ambiguities: 0
rRNA |
2G5K |
3!A:46!B |
G:C |
WC [cWW][XIX] |
10.52 |
49.56; 58.32 |
8.76 |
-3.02 |
0.08 |
2.82 |
rRNA |
2G5K |
4!A:45!B |
C:G |
WC [cWW][XIX] |
10.47 |
52.72; 54.1 |
1.38 |
-0.8 |
0.03 |
7.23 |
rRNA |
2G5K |
5!A:44!B |
G:C |
WC [cWW][XIX] |
10.38 |
55.91; 51.96 |
3.95 |
-8.38 |
0.07 |
12.59 |
rRNA |
2G5K |
6!A:43!B |
U:U |
Wb [cWW][XVI] |
8.82 |
73.02; 41.14 |
31.88 |
-12.49 |
0.17 |
13.19 |
rRNA |
2G5K |
7!A:42!B |
C:G |
WC [cWW][XIX] |
11.14 |
48.09; 44.97 |
3.12 |
-3.54 |
0.12 |
7.95 |
rRNA |
2G5K |
9!A:40!B |
C:A |
pfS* [cWS][-] |
8.01 |
41.16; 129.29 |
88.13 |
-4.81 |
0.04 |
20.76 |
rRNA |
2G5K |
10!A:38!B |
U:A |
WC [cWW][XX] |
10.47 |
51.19; 58.16 |
6.97 |
-3.84 |
0.01 |
9.99 |
rRNA |
2G5K |
11!A:37!B |
C:G |
WC [cWW][XIX] |
10.44 |
51.58; 61.2 |
9.62 |
-2.7 |
0.69 |
20.71 |
rRNA |
2G5K |
12!A:36!B |
C:G |
WC [cWW][XIX] |
10.47 |
56.07; 56.69 |
0.62 |
-1.76 |
0.07 |
5.23 |
rRNA |
2G5K |
13!A:35!B |
G:C |
WC [cWW][XIX] |
10.47 |
56.7; 56.06 |
0.63 |
-1.7 |
0.07 |
5.12 |
rRNA |
2G5K |
14!A:34!B |
G:C |
WC [cWW][XIX] |
10.43 |
61.13; 51.6 |
9.53 |
-2.56 |
0.69 |
20.9 |
rRNA |
2G5K |
15!A:33!B |
A:U |
WC [cWW][XX] |
10.47 |
58.16; 51.18 |
6.99 |
-3.77 |
0.02 |
10.24 |
rRNA |
2G5K |
17!A:32!B |
A:C |
pfS* [cWS][-] |
8.0 |
129.22; 41.22 |
88.0 |
-4.78 |
0.04 |
21.26 |
rRNA |
2G5K |
19!A:30!B |
G:C |
WC [cWW][XIX] |
11.15 |
44.97; 48.16 |
3.2 |
-3.39 |
0.12 |
8.01 |
rRNA |
2G5K |
20!A:29!B |
U:U |
Wb [cWW][XVI] |
8.83 |
41.17; 73.09 |
31.92 |
-12.41 |
0.15 |
13.47 |
rRNA |
2G5K |
21!A:28!B |
C:G |
WC [cWW][XIX] |
10.39 |
52.07; 55.87 |
3.8 |
-8.12 |
0.09 |
12.62 |
rRNA |
2G5K |
22!A:27!B |
G:C |
WC [cWW][XIX] |
10.48 |
54.15; 52.68 |
1.47 |
-1.1 |
0.02 |
7.64 |
rRNA |
2G5K |
23!A:26!B |
C:G |
WC [cWW][XIX] |
10.53 |
58.36; 49.5 |
8.86 |
-2.99 |
0.14 |
3.22 |