Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2G9C BPC Identified: 36 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2G9C 15!A:81!A G:C WC [cWW][XIX] 10.57 48.87; 56.26 7.39 -11.01 0.37 10.73
Riboswitch 2G9C 16!A:80!A G:C WC [cWW][XIX] 10.44 51.84; 50.07 1.76 -14.02 0.3 16.99
Riboswitch 2G9C 17!A:79!A A:U WC [cWW][XX] 10.28 58.03; 58.73 0.7 -12.42 0.2 18.94
Riboswitch 2G9C 18!A:78!A C:G WC [cWW][XIX] 10.6 52.59; 53.47 0.89 -11.79 0.02 18.35
Riboswitch 2G9C 19!A:77!A A:U WC [cWW][XX] 10.34 58.27; 59.06 0.79 -7.98 0.34 13.51
Riboswitch 2G9C 20!A:76!A U:A WC [cWW][XX] 10.26 58.46; 56.13 2.33 -15.53 0.48 22.74
Riboswitch 2G9C 21!A:75!A A:U WC [cWW][XX] 10.52 57.81; 55.19 2.62 -9.27 0.19 14.48
Riboswitch 2G9C 22!A:52!A U:A WC [cWW][XX] 10.46 55.09; 57.19 2.1 2.1 0.68 15.2
Riboswitch 2G9C 23!A:46!A A:G fS [tSW][X] 9.48 3.74; 119.27 115.53 140.59 0.14 5.6
Riboswitch 2G9C 24!A:53!A A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.38 145.96; 136.6 9.36 -129.16 1.9 36.13
Riboswitch 2G9C 25!A:45!A U:A WC [cWW][XX] 10.44 57.47; 57.18 0.29 -13.45 0.15 14.29
Riboswitch 2G9C 26!A:44!A C:A Wb* [cWW][-] 10.71 47.93; 70.22 22.29 -10.98 0.28 18.6
Riboswitch 2G9C 27!A:43!A G:C WC [cWW][XIX] 10.6 55.91; 56.4 0.5 -7.95 0.28 11.7
Riboswitch 2G9C 28!A:42!A C:G WC [cWW][XIX] 10.64 55.72; 57.8 2.08 -1.89 0.06 10.73
Riboswitch 2G9C 29!A:41!A G:C WC [cWW][XIX] 10.63 54.08; 57.24 3.16 -10.0 0.14 14.9
Riboswitch 2G9C 30!A:40!A U:A WC [cWW][XX] 10.37 57.83; 57.86 0.04 -5.61 0.02 7.21
Riboswitch 2G9C 31!A:39!A G:C WC [cWW][XIX] 10.47 57.89; 57.41 0.48 -3.29 0.26 11.12
Riboswitch 2G9C 33!A:66!A A:A rH [tWH][V] 12.26 23.84; 18.84 5.0 135.51 0.15 12.34
Riboswitch 2G9C 33!A:37!A A:G rpS(sb:O2*-N3) [---][-] 5.3 103.32; 157.56 54.24 -13.25 1.91 15.93
Riboswitch 2G9C 34!A:65!A U:A rH_1 [tWH][XXIV] 9.66 30.49; 20.95 9.54 166.79 0.25 7.59
Riboswitch 2G9C 34!A:37!A U:G rpS [cSS][-] 4.35 123.26; 101.23 22.03 123.06 1.19 27.03
Riboswitch 2G9C 35!A:64!A A:A rH [tWH][V] 12.28 22.88; 21.5 1.38 169.81 0.27 6.46
Riboswitch 2G9C 37!A:61!A G:C WC [cWW][XIX] 10.79 51.55; 53.38 1.83 -15.98 0.3 10.76
Riboswitch 2G9C 38!A:66!A G:A fS [tSW][X] 9.3 117.86; 25.92 91.94 -86.46 0.02 34.78
Riboswitch 2G9C 38!A:60!A G:C WC [cWW][XIX] 10.57 55.85; 56.15 0.3 -3.58 0.85 27.96
Riboswitch 2G9C 46!A:53!A G:C WC [cWW][XIX] 10.72 55.84; 54.56 1.28 -1.52 0.94 21.41
Riboswitch 2G9C 49!A:76!A U:A pfS* [cWS][-] 5.98 66.89; 127.36 60.47 26.0 1.03 32.31
Riboswitch 2G9C 50!A:75!A C:U pfS [cSW][-] 7.72 38.55; 131.97 93.42 -32.79 0.56 23.41
Riboswitch 2G9C 54!A:72!A C:G WC [cWW][XIX] 10.46 56.79; 57.24 0.45 -6.9 0.05 12.99
Riboswitch 2G9C 55!A:71!A G:C WC [cWW][XIX] 10.69 53.87; 54.7 0.83 -12.4 0.1 13.42
Riboswitch 2G9C 56!A:70!A G:C WC [cWW][XIX] 10.77 52.63; 54.23 1.6 -14.23 0.19 16.14
Riboswitch 2G9C 57!A:69!A G:U Wb [cWW][XXVIII] 10.49 40.23; 67.4 27.17 -18.31 0.02 18.86
Riboswitch 2G9C 58!A:68!A C:G WC [cWW][XIX] 10.54 54.44; 57.12 2.68 -13.03 0.21 16.36
Riboswitch 2G9C 59!A:67!A A:U WC [cWW][XX] 10.56 57.77; 54.39 3.39 -12.5 0.23 11.46
Riboswitch 2G9C 61!A:65!A C:A pfS [cSW][-] 9.13 130.87; 39.33 91.53 21.65 0.4 20.1
Riboswitch 2G9C 62!A:63!A G:U pS* [cHS][-] 6.51 141.3; 55.43 85.88 11.58 0.02 9.46