Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2GO5 BPC Identified: 110 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
SRP_RNA 2GO5 113!A:238!A A:U WC [cWW][XX] 10.47 50.6; 56.11 5.51 -12.84 0.14 15.27
SRP_RNA 2GO5 114!A:237!A C:G WC [cWW][XIX] 10.74 46.88; 58.59 11.71 -12.73 0.55 11.03
SRP_RNA 2GO5 115!A:236!A A:U WC [cWW][XX] 10.42 56.6; 50.79 5.81 -17.7 0.15 29.04
SRP_RNA 2GO5 116!A:235!A C:G Wb [---][-] 10.68 62.06; 44.73 17.32 -10.39 0.33 14.62
SRP_RNA 2GO5 117!A:234!A U:A WC [cWW][XX] 10.46 55.23; 43.97 11.26 -11.24 0.26 17.94
SRP_RNA 2GO5 119!A:231!A A:A WC [---][-] 10.93 79.05; 69.72 9.32 -12.34 0.83 24.07
SRP_RNA 2GO5 120!A:230!A G:C WC [cWW][XIX] 9.68 58.84; 71.55 12.7 -9.5 0.43 18.79
SRP_RNA 2GO5 121!A:229!A U:U Wb [cWW][XVI] 8.63 51.92; 76.37 24.45 -13.61 0.52 19.28
SRP_RNA 2GO5 122!A:228!A U:A WC [cWW][XX] 10.02 61.25; 67.92 6.67 -11.76 0.23 17.02
SRP_RNA 2GO5 123!A:227!A C:G WC [cWW][XIX] 11.47 53.87; 43.34 10.53 -11.07 0.09 21.08
SRP_RNA 2GO5 124!A:226!A G:U Wb [cWW][XXVIII] 10.1 41.49; 81.12 39.63 -6.69 0.06 11.07
SRP_RNA 2GO5 127!A:223!A A:U WC [cWW][XX] 10.45 62.47; 52.35 10.12 3.16 0.19 49.5
SRP_RNA 2GO5 127!A:173!A A:A rS(sb:O2*-N1)_1 [tSS][-] 8.77 94.48; 55.61 38.87 139.67 0.55 39.41
SRP_RNA 2GO5 128!A:222!A U:G Wb [cWW][XXVIII] 10.85 66.65; 35.72 30.93 20.34 0.35 34.09
SRP_RNA 2GO5 129!A:168!A C:G WC [cWW][XIX] 11.35 41.76; 46.21 4.44 -44.78 0.23 52.28
SRP_RNA 2GO5 130!A:167!A A:U WC [cWW][XX] 10.23 57.62; 60.74 3.11 -33.13 0.18 41.53
SRP_RNA 2GO5 131!A:166!A A:U Wb* [---][-] 11.1 60.43; 40.21 20.22 -7.96 0.5 35.58
SRP_RNA 2GO5 132!A:165!A U:G Wb [cWW][XXVIII] 10.65 59.61; 49.1 10.51 -6.02 0.42 7.31
SRP_RNA 2GO5 133!A:164!A A:G Wb [---][-] 12.86 41.83; 66.85 25.02 -9.48 0.43 16.69
SRP_RNA 2GO5 134!A:163!A U:A WC [cWW][XX] 10.83 56.5; 63.65 7.14 -16.64 0.3 19.89
SRP_RNA 2GO5 135!A:162!A G:C WC [cWW][XIX] 10.64 48.91; 57.12 8.21 -9.1 0.31 7.97
SRP_RNA 2GO5 136!A:214!A G:A rS [tSS][-] 8.32 85.72; 57.0 28.71 151.37 1.19 27.17
SRP_RNA 2GO5 136!A:161!A G:C WC [cWW][XIX] 10.37 53.16; 54.49 1.33 -10.19 0.22 19.54
SRP_RNA 2GO5 137!A:160!A U:A WC [cWW][XX] 10.32 54.48; 56.79 2.31 -5.2 0.21 11.64
SRP_RNA 2GO5 138!A:159!A G:C WC [cWW][XIX] 10.4 54.72; 56.71 1.98 -4.39 0.54 5.92
SRP_RNA 2GO5 139!A:158!A A:C WC [---][-] 10.44 58.69; 60.09 1.4 -7.29 0.91 3.92
SRP_RNA 2GO5 140!A:157!A C:A Wb [cWW][-] 10.11 72.23; 56.48 15.74 -2.2 0.21 11.84
SRP_RNA 2GO5 141!A:156!A C:G Wb [---][-] 10.8 60.95; 48.26 12.69 -4.68 0.33 11.24
SRP_RNA 2GO5 142!A:155!A U:G Wb [cWW][XXVIII] 10.1 70.03; 46.07 23.96 3.48 0.39 6.55
SRP_RNA 2GO5 143!A:154!A C:G WC [cWW][XIX] 10.56 55.68; 59.84 4.16 -3.46 0.31 11.95
SRP_RNA 2GO5 144!A:153!A C:G WC [cWW][XIX] 10.57 49.6; 59.61 10.02 -1.41 0.35 18.75
SRP_RNA 2GO5 145!A:152!A C:G WC [cWW][XIX] 10.33 56.08; 55.23 0.85 2.65 0.05 10.14
SRP_RNA 2GO5 146!A:151!A G:C WC [cWW][XIX] 10.32 59.37; 56.14 3.23 1.35 0.18 18.59
SRP_RNA 2GO5 149!A:201!A A:A rWb* [tWW][I] 13.83 29.86; 23.77 6.09 160.67 0.52 22.42
SRP_RNA 2GO5 149!A:197!A A:G pfS(sb:O2*-N3) [---][-] 5.87 96.78; 143.15 46.36 -24.54 1.36 17.63
SRP_RNA 2GO5 150!A:203!A G:G rS(sb:O2*-N3) [---][-] 5.02 98.11; 100.39 2.28 -136.64 0.21 34.97
SRP_RNA 2GO5 150!A:202!A G:C rS [tSS][-] 8.8 80.2; 68.82 11.39 -145.64 0.45 31.12
SRP_RNA 2GO5 150!A:197!A G:G rpS [cSS][-] 4.4 118.99; 101.64 17.35 116.55 0.36 33.29
SRP_RNA 2GO5 161!A:214!A C:A rpS(bs:O2-O2*) [cSS][-] 5.62 107.43; 143.52 36.08 -38.96 1.23 7.65
SRP_RNA 2GO5 162!A:213!A C:A rpS(sb:O2*-N3) [cSS][-] 5.99 155.05; 86.41 68.63 -41.88 1.29 39.66
SRP_RNA 2GO5 175!A:221!A G:C WC [cWW][XIX] 10.69 60.0; 44.73 15.27 -13.49 0.14 16.49
SRP_RNA 2GO5 177!A:220!A G:C WC [cWW][XIX] 10.6 49.59; 53.55 3.97 -1.27 0.14 3.73
SRP_RNA 2GO5 178!A:219!A G:C WC [cWW][XIX] 10.51 56.82; 49.22 7.6 -8.21 0.28 11.14
SRP_RNA 2GO5 179!A:218!A G:U Wb [cWW][XXVIII] 10.51 36.43; 65.94 29.5 -9.46 0.25 8.37
SRP_RNA 2GO5 180!A:217!A G:C WC [cWW][XIX] 10.39 49.93; 55.85 5.92 -7.56 0.24 10.3
SRP_RNA 2GO5 181!A:216!A U:A WC [cWW][XX] 10.68 57.78; 48.21 9.56 -7.46 0.15 11.09
SRP_RNA 2GO5 182!A:215!A G:A S [tSH][XI] 9.95 94.44; 9.97 84.47 -28.08 0.09 8.03
SRP_RNA 2GO5 187!A:212!A G:C WC [cWW][XIX] 10.54 52.45; 52.51 0.06 -3.64 0.29 7.98
SRP_RNA 2GO5 188!A:211!A G:U Wb [cWW][XXVIII] 10.26 40.88; 65.57 24.68 -9.52 0.24 17.81
SRP_RNA 2GO5 189!A:210!A C:G WC [cWW][XIX] 10.88 46.77; 55.27 8.49 -8.85 0.06 14.86
SRP_RNA 2GO5 190!A:209!A C:G WC [cWW][XIX] 10.61 55.96; 51.49 4.47 0.92 0.02 2.52
SRP_RNA 2GO5 191!A:208!A C:A S [tSH][-] 9.91 77.45; 2.59 74.85 -17.79 0.93 8.56
SRP_RNA 2GO5 192!A:207!A A:C rH_1 [rWH][XXV] 10.91 6.5; 23.47 16.97 -159.96 0.23 13.62
SRP_RNA 2GO5 192!A:206!A A:G S(bp:N1-O2P)_2 [---][-] 12.05 36.99; 60.41 23.42 159.13 2.35 10.32
SRP_RNA 2GO5 193!A:206!A G:G S_1 [tSH][-] 11.54 4.5; 79.09 74.59 26.57 0.11 12.97
SRP_RNA 2GO5 194!A:205!A G:A WC [cWW][VIII] 12.76 44.87; 49.72 4.85 -2.4 0.21 16.21
SRP_RNA 2GO5 195!A:204!A U:G Wb [cWW][XXVIII] 10.52 59.26; 41.02 18.24 -11.26 0.69 16.72
SRP_RNA 2GO5 196!A:203!A C:G WC [cWW][XIX] 10.45 51.37; 50.56 0.81 -7.73 0.1 8.99
SRP_RNA 2GO5 197!A:202!A G:C WC [cWW][XIX] 10.49 55.25; 47.91 7.34 3.93 0.28 8.28
SRP_RNA 2GO5 198!A:201!A G:A S [tSH][XI] 8.91 95.35; 13.82 81.53 -81.58 0.26 25.03
SRP_RNA 2GO5 198!A:200!A G:A S(sb:O2*-N7) [---][-] 7.52 87.0; 36.34 50.66 -167.12 2.67 35.33
SRP_RNA 2GO5 2826!9:2914!9 G:A S [tSH][XI] 9.79 85.59; 7.9 77.69 85.28 0.16 27.09
SRP_RNA 2GO5 2827!9:2913!9 A:A S [tSH][-] 9.34 6.63; 91.71 85.08 -9.78 1.29 24.51
SRP_RNA 2GO5 2828!9:2912!9 G:C WC [cWW][XIX] 10.26 54.21; 63.77 9.56 -4.16 0.06 9.16
SRP_RNA 2GO5 2829!9:2911!9 G:C WC [cWW][XIX] 10.26 54.72; 61.58 6.86 -0.38 0.14 9.21
SRP_RNA 2GO5 2830!9:2910!9 U:A WC [cWW][XX] 10.48 50.1; 58.2 8.1 1.82 0.01 9.67
SRP_RNA 2GO5 2831!9:2909!9 C:G WC [cWW][XIX] 10.51 55.1; 67.46 12.36 13.15 0.11 11.04
SRP_RNA 2GO5 2832!9:2908!9 C:A pfS [cSW][-] 9.4 121.45; 30.81 90.64 4.77 0.58 6.65
SRP_RNA 2GO5 2832!9:2848!9 C:G WC [cWW][XIX] 11.03 50.2; 53.54 3.34 -10.64 1.11 27.95
SRP_RNA 2GO5 2833!9:2906!9 C:A rpS(bs:O2-O2*) [cSS][-] 5.69 107.87; 156.24 48.38 -27.56 1.66 8.41
SRP_RNA 2GO5 2833!9:2847!9 C:G WC [cWW][XIX] 10.61 55.89; 54.29 1.59 -8.92 0.28 22.82
SRP_RNA 2GO5 2834!9:2853!9 G:U rS(bs:O2-O2*) [---][-] 5.49 101.82; 97.48 4.34 -152.11 1.67 30.59
SRP_RNA 2GO5 2834!9:2846!9 G:C WC [cWW][XIX] 10.59 53.52; 53.73 0.21 -5.72 0.62 22.09
SRP_RNA 2GO5 2835!9:2853!9 C:U rS(ss:O2*-O2*) [---][-] 5.47 131.54; 147.28 15.74 -117.82 0.33 35.57
SRP_RNA 2GO5 2835!9:2845!9 C:G WC [cWW][XIX] 10.5 53.79; 58.78 5.0 -11.32 0.19 15.32
SRP_RNA 2GO5 2836!9:2844!9 G:C WC [cWW][XIX] 10.53 55.21; 55.43 0.22 -16.85 0.29 23.66
SRP_RNA 2GO5 2838!9:2843!9 A:A pfS [cSW][-] 9.18 123.39; 39.3 84.09 -4.01 0.14 18.56
SRP_RNA 2GO5 2847!9:2906!9 G:A rS [tSS][-] 8.41 86.44; 62.9 23.55 164.84 0.96 21.62
SRP_RNA 2GO5 2848!9:2907!9 G:C pS*(ps:O1P-O2*) [---][-] 10.17 109.54; 79.57 29.97 -27.13 0.29 24.87
SRP_RNA 2GO5 2851!9:2906!9 G:A S [tSH][XI] 8.8 100.9; 20.68 80.22 63.87 0.31 31.97
SRP_RNA 2GO5 2852!9:2903!9 A:C rH* [---][-] 13.22 46.56; 10.98 35.58 107.02 0.02 37.55
SRP_RNA 2GO5 2853!9:2905!9 U:A WC [cWW][XX] 10.42 56.33; 58.14 1.81 -1.83 0.02 7.99
SRP_RNA 2GO5 2853!9:2902!9 U:A rS* [tHH][-] 12.29 2.35; 18.15 15.79 18.44 0.09 21.66
SRP_RNA 2GO5 2854!9:2904!9 A:U WC [cWW][XX] 10.52 57.77; 53.5 4.27 1.38 0.05 1.83
SRP_RNA 2GO5 2855!9:2903!9 G:C WC [cWW][XIX] 10.69 53.82; 53.17 0.65 -1.92 0.01 20.48
SRP_RNA 2GO5 2856!9:2901!9 A:C sWb [---][-] 10.92 30.09; 79.92 49.82 -15.02 0.31 23.11
SRP_RNA 2GO5 2857!9:2900!9 C:G WC [cWW][XIX] 10.8 47.49; 55.04 7.56 -18.09 0.14 26.44
SRP_RNA 2GO5 2858!9:2899!9 U:A WC [cWW][XX] 10.49 54.27; 54.44 0.17 -9.3 0.3 9.48
SRP_RNA 2GO5 2859!9:2898!9 C:G WC [cWW][XIX] 10.62 56.1; 52.73 3.37 -6.88 0.22 15.49
SRP_RNA 2GO5 2860!9:2897!9 G:C WC [cWW][XIX] 10.61 55.93; 54.85 1.09 -1.51 0.18 14.74
SRP_RNA 2GO5 2861!9:2895!9 G:C WC [cWW][XIX] 10.65 49.6; 54.33 4.73 -2.33 0.18 0.05
SRP_RNA 2GO5 2862!9:2894!9 G:C WC [cWW][XIX] 10.44 53.64; 60.13 6.48 1.31 0.08 16.8
SRP_RNA 2GO5 2863!9:2893!9 G:C WC [cWW][XIX] 10.56 52.08; 56.33 4.25 0.6 0.28 12.85
SRP_RNA 2GO5 2864!9:2892!9 U:G Wb [cWW][XXVIII] 10.57 67.82; 38.47 29.35 -3.45 0.34 1.47
SRP_RNA 2GO5 2865!9:2891!9 G:A S [tSH][XI] 9.15 103.69; 19.38 84.31 -53.47 0.64 30.35
SRP_RNA 2GO5 2866!9:2889!9 U:U rS [---][-] 6.01 90.07; 82.3 7.77 165.89 1.98 18.42
SRP_RNA 2GO5 2867!9:2891!9 G:A S*(bs:N7-O2*) [---][-] 6.72 45.16; 86.35 41.19 168.46 2.53 40.55
SRP_RNA 2GO5 2867!9:2889!9 G:U rS*(bp:N3-O2P)_1 [---][-] 8.6 33.86; 42.23 8.37 -69.17 2.41 34.08
SRP_RNA 2GO5 2868!9:2889!9 C:U rS* [tHH][-] 12.01 25.86; 20.29 5.57 -54.43 1.95 39.07
SRP_RNA 2GO5 2869!9:2888!9 G:U Wb [cWW][XXVIII] 10.27 42.66; 70.31 27.65 -4.84 0.7 14.56
SRP_RNA 2GO5 2870!9:2887!9 C:G WC [cWW][XIX] 10.71 51.47; 54.29 2.81 -1.55 0.05 5.37
SRP_RNA 2GO5 2871!9:2886!9 G:C WC [cWW][XIX] 10.42 53.27; 56.36 3.09 3.67 0.38 8.7
SRP_RNA 2GO5 2872!9:2885!9 U:A WC [cWW][XX] 10.34 53.67; 58.95 5.28 7.91 0.02 8.48
SRP_RNA 2GO5 2873!9:2884!9 C:G WC [cWW][XIX] 10.64 56.85; 59.08 2.23 -2.5 0.37 10.48
SRP_RNA 2GO5 2874!9:2883!9 G:A S [tSH][XI] 9.53 97.28; 5.54 91.74 30.43 0.72 17.41
SRP_RNA 2GO5 2875!9:2882!9 A:G S [tSH][XI] 9.3 12.05; 106.61 94.56 9.41 0.09 15.79
SRP_RNA 2GO5 2876!9:2881!9 G:C WC [cWW][XIX] 10.56 49.21; 55.18 5.97 13.56 0.14 15.11
SRP_RNA 2GO5 2877!9:2880!9 G:A S [tSH][XI] 8.78 98.16; 14.71 83.45 -85.99 0.68 22.87
SRP_RNA 2GO5 2877!9:2879!9 G:A S(sb:O2*-N7) [---][-] 7.43 88.77; 31.46 57.31 -173.43 1.61 30.08
SRP_RNA 2GO5 2902!9:2905!9 A:A rpS* [---][-] 10.54 70.56; 14.05 56.51 5.6 0.2 18.79