Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2GOZ BPC Identified: 29 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HH_Ribozyme 2GOZ 1!A:20!B G:C WC [cWW][XIX] 10.58 54.87; 59.27 4.4 -4.47 0.34 8.09
HH_Ribozyme 2GOZ 2!A:19!B G:C WC [cWW][XIX] 10.56 52.45; 53.54 1.09 -5.4 0.56 13.42
HH_Ribozyme 2GOZ 3!A:18!B A:U WC [cWW][XX] 10.57 56.58; 54.83 1.75 -5.99 0.04 10.22
HH_Ribozyme 2GOZ 4!A:17!B U:A sWC [---][-] 11.04 82.36; 27.36 55.0 0.22 0.14 12.52
HH_Ribozyme 2GOZ 4!A:15!B U:C WC_mo [cWW][XVIII] 11.79 30.84; 39.24 8.4 10.13 0.47 12.09
HH_Ribozyme 2GOZ 5!A:14!B G:C WC [cWW][XIX] 10.79 50.0; 50.79 0.8 -11.81 0.61 12.77
HH_Ribozyme 2GOZ 6!A:28!A U:A rH_1 [tWH][XXIV] 9.75 31.79; 18.85 12.95 149.91 0.02 13.7
HH_Ribozyme 2GOZ 8!A:26!A C:C rH_2 [tWH][-] 9.46 24.69; 32.59 7.9 165.7 0.13 10.56
HH_Ribozyme 2GOZ 9!A:12!B U:A WC [cWW][XX] 10.5 53.42; 59.29 5.87 -12.92 0.01 14.39
HH_Ribozyme 2GOZ 10!A:11!B A:U WC [cWW][XX] 10.24 55.67; 57.55 1.88 -11.42 0.69 23.88
HH_Ribozyme 2GOZ 11!A:10!B C:G WC [cWW][XIX] 10.45 58.15; 56.11 2.04 -12.51 0.79 23.58
HH_Ribozyme 2GOZ 12!A:9!B C:G WC [cWW][XIX] 10.64 55.42; 53.54 1.88 -3.91 0.22 10.04
HH_Ribozyme 2GOZ 13!A:8!B A:U WC [cWW][XX] 10.43 53.81; 56.07 2.26 -10.24 0.01 15.52
HH_Ribozyme 2GOZ 14!A:7!B G:C WC [cWW][XIX] 10.61 55.83; 54.51 1.33 -10.54 0.17 12.06
HH_Ribozyme 2GOZ 15!A:20!A C:G WC [cWW][XIX] 10.53 55.81; 53.06 2.75 -4.41 0.1 9.72
HH_Ribozyme 2GOZ 16!A:18!A U:A S(sb:O2*-N7) [---][-] 6.67 78.37; 39.72 38.65 -170.92 1.15 23.85
HH_Ribozyme 2GOZ 17!A:39!A G:A pfS(sb:O2*-N3) [---][-] 5.54 135.37; 93.54 41.82 -63.1 1.71 49.81
HH_Ribozyme 2GOZ 21!A:36!A A:G S [tSH][XI] 9.65 12.99; 98.77 85.78 -19.01 0.52 16.01
HH_Ribozyme 2GOZ 22!A:35!A G:C WC [cWW][XIX] 10.74 50.04; 54.96 4.92 -8.19 0.04 13.61
HH_Ribozyme 2GOZ 23!A:34!A U:A WC [cWW][XX] 10.91 46.92; 52.77 5.85 -7.41 0.16 18.1
HH_Ribozyme 2GOZ 24!A:33!A C:G WC [cWW][XIX] 10.38 58.49; 48.43 10.05 -8.05 0.04 10.39
HH_Ribozyme 2GOZ 25!A:32!A C:G WC [cWW][XIX] 10.7 52.26; 50.1 2.15 -7.71 0.11 11.52
HH_Ribozyme 2GOZ 31!A:13!B A:U rH_1 [tWH][XXIV] 9.46 19.64; 35.32 15.68 -154.99 0.17 12.64
HH_Ribozyme 2GOZ 37!A:6!B A:C rH_2_Mo [---][-] 11.28 6.24; 61.6 55.37 -134.54 0.04 15.51
HH_Ribozyme 2GOZ 39!A:5!B A:U WC [cWW][XX] 10.52 55.82; 55.04 0.77 -10.48 0.18 14.61
HH_Ribozyme 2GOZ 40!A:4!B C:G WC [cWW][XIX] 10.57 53.43; 55.23 1.8 -10.59 0.67 24.86
HH_Ribozyme 2GOZ 41!A:3!B G:C WC [cWW][XIX] 10.54 52.48; 55.24 2.76 -12.37 0.17 18.41
HH_Ribozyme 2GOZ 42!A:2!B C:G WC [cWW][XIX] 10.53 57.69; 52.6 5.09 -11.41 0.23 18.5
HH_Ribozyme 2GOZ 43!A:1!B C:G WC [cWW][XIX] 10.61 55.47; 52.07 3.4 -3.3 0.22 9.28