Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2GQ4
BPC Identified: 16
Ambiguities: 0
rRNA |
2GQ4 |
79!K:97!L |
C:G |
WC [cWW][XIX] |
10.87 |
53.69; 47.0 |
6.69 |
4.94 |
0.39 |
11.32 |
rRNA |
2GQ4 |
80!K:96!L |
U:G |
Wb [cWW][XXVIII] |
10.49 |
67.05; 40.63 |
26.42 |
10.54 |
0.92 |
21.82 |
rRNA |
2GQ4 |
81!K:95!L |
G:U |
Wb [cWW][XXVIII] |
10.47 |
41.99; 67.85 |
25.86 |
3.73 |
0.61 |
14.06 |
rRNA |
2GQ4 |
82!K:94!L |
G:C |
WC [cWW][XIX] |
10.65 |
54.4; 53.88 |
0.52 |
7.57 |
0.89 |
10.43 |
rRNA |
2GQ4 |
83!K:93!L |
G:C |
WC [cWW][XIX] |
10.61 |
56.4; 53.67 |
2.73 |
9.42 |
0.19 |
18.1 |
rRNA |
2GQ4 |
84!K:92!L |
C:G |
WC [cWW][XIX] |
10.84 |
62.28; 50.16 |
12.12 |
3.72 |
0.31 |
4.62 |
rRNA |
2GQ4 |
85!K:91!L |
G:C |
WC [cWW][XIX] |
10.73 |
51.59; 56.92 |
5.33 |
11.7 |
0.65 |
14.14 |
rRNA |
2GQ4 |
86!K:90!L |
G:C |
WC [cWW][XIX] |
10.96 |
48.69; 52.48 |
3.79 |
9.48 |
0.2 |
16.37 |
rRNA |
2GQ4 |
79!M:97!N |
C:G |
WC [cWW][XIX] |
10.86 |
54.25; 53.22 |
1.03 |
-3.26 |
0.07 |
7.28 |
rRNA |
2GQ4 |
80!M:96!N |
U:G |
Wb [cWW][XXVIII] |
10.44 |
70.15; 40.75 |
29.4 |
4.99 |
0.57 |
14.69 |
rRNA |
2GQ4 |
81!M:95!N |
G:U |
Wb [cWW][XXVIII] |
10.44 |
40.4; 69.99 |
29.59 |
2.82 |
0.03 |
11.2 |
rRNA |
2GQ4 |
82!M:94!N |
G:C |
WC [cWW][XIX] |
10.89 |
53.28; 53.09 |
0.19 |
7.06 |
0.74 |
8.89 |
rRNA |
2GQ4 |
83!M:93!N |
G:C |
WC [cWW][XIX] |
10.7 |
54.11; 56.81 |
2.7 |
10.19 |
0.47 |
14.34 |
rRNA |
2GQ4 |
84!M:92!N |
C:G |
WC [cWW][XIX] |
10.79 |
55.04; 53.06 |
1.97 |
11.24 |
0.46 |
14.49 |
rRNA |
2GQ4 |
85!M:91!N |
G:C |
WC [cWW][XIX] |
10.62 |
56.27; 56.76 |
0.49 |
13.55 |
0.02 |
20.53 |
rRNA |
2GQ4 |
86!M:90!N |
G:C |
WC [cWW][XIX] |
10.87 |
50.66; 52.54 |
1.88 |
7.66 |
0.01 |
11.66 |