Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2GQ6
BPC Identified: 16
Ambiguities: 0
| rRNA |
2GQ6 |
79!K:97!L |
C:G |
WC [cWW][XIX] |
10.78 |
51.98; 50.29 |
1.68 |
2.81 |
0.22 |
7.65 |
| rRNA |
2GQ6 |
80!K:96!L |
U:G |
Wb [cWW][XXVIII] |
10.38 |
66.71; 41.72 |
24.99 |
11.41 |
1.02 |
23.8 |
| rRNA |
2GQ6 |
81!K:95!L |
G:U |
Wb [cWW][XXVIII] |
10.35 |
42.79; 68.75 |
25.96 |
7.01 |
0.52 |
14.08 |
| rRNA |
2GQ6 |
82!K:94!L |
G:C |
WC [cWW][XIX] |
10.6 |
54.24; 54.13 |
0.11 |
8.51 |
0.02 |
10.96 |
| rRNA |
2GQ6 |
83!K:93!L |
G:C |
WC [cWW][XIX] |
10.38 |
56.72; 56.87 |
0.15 |
12.38 |
0.3 |
21.01 |
| rRNA |
2GQ6 |
84!K:92!L |
C:G |
WC [cWW][XIX] |
10.64 |
63.88; 49.1 |
14.78 |
7.07 |
0.04 |
9.72 |
| rRNA |
2GQ6 |
85!K:91!L |
G:C |
WC [cWW][XIX] |
10.54 |
58.23; 57.89 |
0.34 |
12.65 |
0.06 |
17.06 |
| rRNA |
2GQ6 |
86!K:90!L |
G:C |
WC [cWW][XIX] |
10.9 |
50.54; 51.55 |
1.01 |
12.35 |
0.16 |
17.9 |
| rRNA |
2GQ6 |
79!M:97!N |
C:G |
WC [cWW][XIX] |
10.75 |
54.81; 52.87 |
1.94 |
-1.26 |
0.02 |
4.63 |
| rRNA |
2GQ6 |
80!M:96!N |
U:G |
Wb [cWW][XXVIII] |
10.32 |
71.38; 41.97 |
29.41 |
7.69 |
0.59 |
16.41 |
| rRNA |
2GQ6 |
81!M:95!N |
G:U |
Wb [cWW][XXVIII] |
10.28 |
39.9; 70.04 |
30.13 |
1.55 |
0.33 |
11.28 |
| rRNA |
2GQ6 |
82!M:94!N |
G:C |
WC [cWW][XIX] |
10.74 |
53.2; 52.83 |
0.38 |
5.52 |
0.1 |
9.66 |
| rRNA |
2GQ6 |
83!M:93!N |
G:C |
WC [cWW][XIX] |
10.58 |
55.67; 56.85 |
1.18 |
10.25 |
0.11 |
14.16 |
| rRNA |
2GQ6 |
84!M:92!N |
C:G |
WC [cWW][XIX] |
10.6 |
55.9; 53.32 |
2.57 |
9.51 |
0.11 |
14.75 |
| rRNA |
2GQ6 |
85!M:91!N |
G:C |
WC [cWW][XIX] |
10.5 |
58.74; 58.16 |
0.58 |
14.59 |
0.51 |
23.78 |
| rRNA |
2GQ6 |
86!M:90!N |
G:C |
WC [cWW][XIX] |
10.76 |
51.48; 53.45 |
1.97 |
7.86 |
0.12 |
11.67 |