Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2GQ7
BPC Identified: 16
Ambiguities: 0
rRNA |
2GQ7 |
79!K:97!L |
C:G |
WC [cWW][XIX] |
10.77 |
55.84; 48.37 |
7.46 |
4.33 |
0.32 |
8.89 |
rRNA |
2GQ7 |
80!K:96!L |
U:G |
Wb [cWW][XXVIII] |
10.36 |
68.33; 41.99 |
26.34 |
12.01 |
0.96 |
22.82 |
rRNA |
2GQ7 |
81!K:95!L |
G:U |
Wb [cWW][XXVIII] |
10.33 |
43.96; 66.48 |
22.51 |
4.26 |
0.64 |
15.65 |
rRNA |
2GQ7 |
82!K:94!L |
G:C |
WC [cWW][XIX] |
10.53 |
55.35; 53.91 |
1.44 |
8.14 |
0.79 |
11.57 |
rRNA |
2GQ7 |
83!K:93!L |
G:C |
WC [cWW][XIX] |
10.48 |
56.64; 54.42 |
2.22 |
11.42 |
0.35 |
20.53 |
rRNA |
2GQ7 |
84!K:92!L |
C:G |
WC [cWW][XIX] |
10.7 |
63.12; 51.28 |
11.84 |
6.82 |
0.02 |
8.57 |
rRNA |
2GQ7 |
85!K:91!L |
G:C |
WC [cWW][XIX] |
10.63 |
53.06; 59.31 |
6.25 |
10.52 |
0.7 |
13.43 |
rRNA |
2GQ7 |
86!K:90!L |
G:C |
WC [cWW][XIX] |
10.71 |
46.76; 55.89 |
9.13 |
13.83 |
0.07 |
18.56 |
rRNA |
2GQ7 |
79!M:97!N |
C:G |
WC [cWW][XIX] |
10.66 |
55.2; 54.6 |
0.6 |
-2.02 |
0.14 |
5.7 |
rRNA |
2GQ7 |
80!M:96!N |
U:G |
Wb [cWW][XXVIII] |
10.3 |
70.56; 43.01 |
27.55 |
6.27 |
0.67 |
16.76 |
rRNA |
2GQ7 |
81!M:95!N |
G:U |
Wb [cWW][XXVIII] |
10.29 |
42.58; 70.76 |
28.19 |
4.09 |
0.15 |
10.3 |
rRNA |
2GQ7 |
82!M:94!N |
G:C |
WC [cWW][XIX] |
10.75 |
53.86; 54.54 |
0.68 |
7.35 |
0.8 |
8.97 |
rRNA |
2GQ7 |
83!M:93!N |
G:C |
WC [cWW][XIX] |
10.52 |
56.5; 58.1 |
1.6 |
12.06 |
0.33 |
13.56 |
rRNA |
2GQ7 |
84!M:92!N |
C:G |
WC [cWW][XIX] |
10.55 |
57.03; 54.5 |
2.53 |
10.34 |
0.51 |
13.14 |
rRNA |
2GQ7 |
85!M:91!N |
G:C |
WC [cWW][XIX] |
10.45 |
59.45; 58.7 |
0.76 |
14.68 |
0.11 |
22.02 |
rRNA |
2GQ7 |
86!M:90!N |
G:C |
WC [cWW][XIX] |
10.71 |
52.7; 54.06 |
1.35 |
10.35 |
0.04 |
10.85 |