Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2H0X BPC Identified: 76 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2H0X 0!A:65!B A:G rS [tSS][-] 7.96 65.56; 89.31 23.76 155.59 1.11 28.21
Riboswitch 2H0X 2!A:64!B C:G WC [cWW][XIX] 10.63 56.32; 55.53 0.79 2.8 0.09 3.16
Riboswitch 2H0X 3!A:63!B G:C WC [cWW][XIX] 10.62 52.89; 55.65 2.76 -4.49 0.02 7.47
Riboswitch 2H0X 4!A:62!B C:G WC [cWW][XIX] 10.55 57.13; 54.08 3.05 -7.39 0.05 10.64
Riboswitch 2H0X 5!A:61!B C:G WC [cWW][XIX] 10.72 55.33; 53.57 1.77 5.59 0.12 1.83
Riboswitch 2H0X 7!A:60!B G:C WC [cWW][XIX] 10.56 55.45; 56.1 0.65 3.03 0.02 7.75
Riboswitch 2H0X 7!A:34!B G:G S_1 [tSH][-] 11.44 8.28; 82.46 74.18 32.65 0.2 8.64
Riboswitch 2H0X 8!A:58!B G:A rS [tSS][-] 8.11 87.87; 61.01 26.86 129.22 1.43 55.17
Riboswitch 2H0X 8!A:33!B G:U Wb [cWW][XXVIII] 11.14 33.07; 61.71 28.63 -9.98 0.62 29.18
Riboswitch 2H0X 9!A:32!B A:U WC [cWW][XX] 10.48 53.68; 53.22 0.46 -13.16 0.71 23.19
Riboswitch 2H0X 10!A:117!B C:A rpS(ss:O2*-O2*)_1 [cSS][-] 5.81 108.02; 146.19 38.18 -36.26 2.16 2.4
Riboswitch 2H0X 10!A:31!B C:G WC [cWW][XIX] 10.51 55.36; 55.13 0.24 -11.85 0.08 22.91
Riboswitch 2H0X 11!A:116!B U:G rpS [cSS][-] 5.57 151.81; 100.31 51.5 -61.69 0.19 25.63
Riboswitch 2H0X 11!A:30!B U:A WC [cWW][XX] 10.39 55.03; 55.36 0.33 -13.72 0.15 17.66
Riboswitch 2H0X 12!A:115!B U:C fS(sb:O2*-N3) [---][-] 7.5 167.9; 40.45 127.45 149.0 0.83 34.38
Riboswitch 2H0X 12!A:29!B U:A WC [cWW][XX] 10.44 54.58; 54.28 0.3 -8.64 0.13 11.46
Riboswitch 2H0X 13!A:28!B A:U WC [cWW][XX] 10.64 56.66; 53.91 2.76 -11.88 0.05 16.98
Riboswitch 2H0X 14!A:27!B A:U WC [cWW][XX] 10.54 54.77; 53.94 0.83 -12.67 0.37 18.89
Riboswitch 2H0X 15!A:26!B A:U WC [cWW][XX] 10.51 56.15; 54.9 1.24 -8.43 0.29 15.4
Riboswitch 2H0X 16!A:25!B G:C WC [cWW][XIX] 10.59 54.93; 54.18 0.75 -7.01 0.11 10.95
Riboswitch 2H0X 17!A:24!B C:G WC [cWW][XIX] 10.52 63.55; 53.07 10.48 -9.33 0.16 17.4
Riboswitch 2H0X 18!A:23!B C:G WC [cWW][XIX] 10.65 57.74; 50.06 7.67 -3.29 0.13 4.93
Riboswitch 2H0X 31!B:117!B G:A rS [tSS][-] 8.45 88.62; 57.26 31.36 161.63 0.78 22.78
Riboswitch 2H0X 32!B:118!B U:C rS(ss:O2*-O2*) [---][-] 5.87 160.37; 158.76 1.61 -136.6 0.49 14.45
Riboswitch 2H0X 35!B:36!B A:C pS* [cHS][-] 6.85 142.77; 40.1 102.67 31.9 0.27 31.53
Riboswitch 2H0X 36!B:105!B C:A rpS(sb:O2*-N3) [cSS][-] 5.49 132.65; 91.26 41.39 -83.53 0.96 61.61
Riboswitch 2H0X 36!B:53!B C:G WC [cWW][XIX] 10.53 56.7; 53.72 2.98 -0.65 0.27 13.11
Riboswitch 2H0X 37!B:127!B G:A fS [tSW][X] 10.09 100.02; 47.66 52.36 111.0 1.0 64.2
Riboswitch 2H0X 37!B:104!B G:A rpS(sb:O2*-N3) [---][-] 5.64 139.44; 88.27 51.17 -70.99 1.73 60.71
Riboswitch 2H0X 37!B:52!B G:C WC [cWW][XIX] 10.56 52.72; 57.12 4.4 -7.69 0.15 9.92
Riboswitch 2H0X 38!B:51!B A:U WC [cWW][XX] 10.23 57.65; 57.35 0.31 -9.58 0.08 12.85
Riboswitch 2H0X 42!B:73!B C:G WC [cWW][XIX] 10.61 55.43; 53.14 2.29 -11.18 0.12 13.37
Riboswitch 2H0X 43!B:72!B A:U WC [cWW][XX] 10.46 57.91; 56.43 1.48 -8.23 0.3 11.6
Riboswitch 2H0X 44!B:71!B G:C WC [cWW][XIX] 10.6 53.93; 55.05 1.12 -7.41 0.03 12.78
Riboswitch 2H0X 45!B:70!B G:C WC [cWW][XIX] 10.54 53.5; 52.95 0.54 -7.76 0.17 15.25
Riboswitch 2H0X 46!B:69!B G:C WC [cWW][XIX] 10.64 57.05; 52.07 4.99 -13.88 0.65 33.25
Riboswitch 2H0X 47!B:68!B U:G Wb [cWW][XXVIII] 10.69 64.94; 38.42 26.51 -10.74 0.31 18.92
Riboswitch 2H0X 48!B:50!B U:A H_1 [cWH][XXIII] 7.91 70.45; 51.55 18.9 6.67 0.02 5.11
Riboswitch 2H0X 52!B:128!B C:G rpS [cSS][-] 5.59 131.62; 99.78 31.84 -92.23 0.04 58.51
Riboswitch 2H0X 53!B:127!B G:A rpS(sb:O2*-N3) [---][-] 5.76 141.27; 87.98 53.29 -75.02 1.61 65.68
Riboswitch 2H0X 53!B:104!B G:A fS [tSW][X] 9.96 100.71; 44.85 55.86 112.64 1.18 62.12
Riboswitch 2H0X 54!B:106!B A:A rS(sb:O2*-N1)_1 [tSS][-] 7.79 94.53; 53.91 40.62 167.59 0.54 40.42
Riboswitch 2H0X 54!B:59!B A:U rWC [tWW][XXI] 11.21 30.59; 41.84 11.25 -161.31 0.38 12.11
Riboswitch 2H0X 74!B:90!B C:G WC [cWW][XIX] 10.68 53.42; 53.31 0.11 -9.86 0.2 16.46
Riboswitch 2H0X 75!B:93!B G:A rS [tSS][-] 8.2 86.26; 56.39 29.87 146.55 1.3 47.81
Riboswitch 2H0X 75!B:89!B G:C WC [cWW][XIX] 10.65 54.57; 54.12 0.46 -20.53 0.38 27.14
Riboswitch 2H0X 76!B:88!B G:C WC [cWW][XIX] 10.72 52.24; 54.09 1.85 -12.04 0.18 12.68
Riboswitch 2H0X 77!B:87!B U:A WC [cWW][XX] 10.61 54.39; 54.82 0.43 -13.02 0.01 15.51
Riboswitch 2H0X 78!B:86!B C:G WC [cWW][XIX] 10.61 56.13; 52.88 3.25 -8.43 0.34 14.54
Riboswitch 2H0X 79!B:81!B U:C H_2 [---][-] 9.18 93.75; 28.71 65.03 -39.8 2.12 51.58
Riboswitch 2H0X 80!B:144!B U:A WC [cWW][XX] 11.03 51.03; 53.5 2.48 -16.23 0.27 19.97
Riboswitch 2H0X 81!B:143!B C:G WC [cWW][XIX] 10.47 56.49; 54.4 2.09 -12.18 0.43 19.5
Riboswitch 2H0X 82!B:142!B C:G WC [cWW][XIX] 10.64 55.37; 54.27 1.1 -7.49 0.01 12.75
Riboswitch 2H0X 83!B:141!B U:A WC [cWW][XX] 10.45 56.23; 55.33 0.9 -9.41 0.0 12.45
Riboswitch 2H0X 84!B:140!B G:C WC [cWW][XIX] 10.57 53.54; 53.52 0.02 -5.56 0.02 10.36
Riboswitch 2H0X 85!B:139!B C:G WC [cWW][XIX] 10.41 58.02; 57.66 0.36 -8.46 0.24 15.42
Riboswitch 2H0X 89!B:93!B C:A rpS(bs:O2-O2*) [cSS][-] 5.78 103.7; 147.45 43.76 -38.97 1.57 22.5
Riboswitch 2H0X 90!B:91!B G:U pS* [cHS][-] 6.15 134.15; 58.55 75.6 45.41 0.64 42.96
Riboswitch 2H0X 95!B:137!B A:G S [tSH][XI] 9.5 10.37; 97.43 87.05 -17.43 0.68 12.93
Riboswitch 2H0X 96!B:136!B G:C WC [cWW][XIX] 10.5 54.86; 56.9 2.04 -4.03 0.07 10.68
Riboswitch 2H0X 97!B:135!B G:C WC [cWW][XIX] 10.46 53.34; 58.24 4.91 0.64 0.09 6.67
Riboswitch 2H0X 98!B:134!B A:U WC [cWW][XX] 10.42 56.56; 57.08 0.52 -5.85 0.13 8.37
Riboswitch 2H0X 99!B:133!B C:G WC [cWW][XIX] 10.44 56.97; 55.38 1.59 -9.71 0.33 9.64
Riboswitch 2H0X 100!B:132!B U:A WC [cWW][XX] 10.31 58.13; 57.7 0.43 -13.73 0.12 14.0
Riboswitch 2H0X 101!B:131!B G:C WC [cWW][XIX] 10.55 54.72; 54.2 0.52 -16.34 0.26 19.5
Riboswitch 2H0X 102!B:129!B G:A S [tSH][XI] 10.5 78.5; 25.01 53.49 -171.62 0.09 8.28
Riboswitch 2H0X 105!B:126!B A:U rH_1 [tWH][XXIV] 9.97 17.68; 34.22 16.54 168.68 0.09 3.94
Riboswitch 2H0X 106!B:125!B A:A rH [tWH][V] 12.12 21.73; 22.95 1.22 139.95 0.28 15.63
Riboswitch 2H0X 107!B:124!B A:C rH_1 [rWH][XXV] 11.08 5.35; 31.57 26.22 62.81 0.32 42.72
Riboswitch 2H0X 108!B:123!B C:G WC [cWW][XIX] 10.62 51.87; 55.11 3.24 -11.6 0.48 21.75
Riboswitch 2H0X 109!B:122!B C:G WC [cWW][XIX] 10.68 53.22; 52.53 0.68 -12.37 0.07 13.31
Riboswitch 2H0X 110!B:121!B A:U WC [cWW][XX] 10.66 53.9; 53.72 0.19 -13.36 0.01 17.11
Riboswitch 2H0X 111!B:120!B C:G WC [cWW][XIX] 10.67 54.15; 51.81 2.34 -11.08 0.13 18.02
Riboswitch 2H0X 112!B:119!B A:U WC [cWW][XX] 10.29 57.72; 58.36 0.64 -5.95 0.03 10.72
Riboswitch 2H0X 113!B:118!B G:C WC [cWW][XIX] 10.59 55.03; 57.48 2.45 4.32 0.14 1.67
Riboswitch 2H0X 114!B:117!B G:A S_mo [tSH][XI] 10.06 84.72; 21.68 63.04 -149.69 0.38 20.97