Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2H0Z BPC Identified: 75 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2H0Z 0!A:65!B A:G rS [tSS][-] 8.03 61.48; 85.0 23.52 151.55 0.9 37.97
Riboswitch 2H0Z 2!A:64!B C:G WC [cWW][XIX] 10.62 58.71; 56.26 2.44 4.2 0.02 6.76
Riboswitch 2H0Z 3!A:63!B G:C WC [cWW][XIX] 10.76 53.65; 53.99 0.34 -0.2 0.08 6.4
Riboswitch 2H0Z 4!A:62!B C:G WC [cWW][XIX] 10.64 56.4; 55.65 0.75 -4.81 0.15 10.56
Riboswitch 2H0Z 5!A:61!B C:G WC [cWW][XIX] 10.63 56.95; 53.87 3.08 5.47 0.04 3.88
Riboswitch 2H0Z 7!A:60!B G:C WC [cWW][XIX] 10.67 54.68; 56.68 2.0 3.17 0.32 9.42
Riboswitch 2H0Z 7!A:34!B G:G S_1 [tSH][-] 11.53 8.34; 80.3 71.96 40.98 0.45 8.86
Riboswitch 2H0Z 8!A:58!B G:A rS [tSS][-] 8.13 87.26; 59.88 27.38 128.88 1.29 60.28
Riboswitch 2H0Z 8!A:33!B G:U Wb [cWW][XXVIII] 11.23 33.22; 62.58 29.36 -7.32 0.69 31.43
Riboswitch 2H0Z 9!A:32!B A:U WC [cWW][XX] 10.51 55.29; 53.88 1.4 -12.22 0.89 24.84
Riboswitch 2H0Z 10!A:117!B C:A rpS(ss:O2*-O2*)_1 [cSS][-] 5.78 105.09; 148.06 42.96 -34.25 1.74 0.5
Riboswitch 2H0Z 10!A:31!B C:G WC [cWW][XIX] 10.46 52.36; 55.28 2.92 -11.84 0.28 21.19
Riboswitch 2H0Z 11!A:116!B U:G rpS [cSS][-] 5.55 148.5; 100.22 48.28 -62.24 0.09 25.77
Riboswitch 2H0Z 11!A:30!B U:A WC [cWW][XX] 10.59 53.39; 55.15 1.76 -13.02 0.09 17.21
Riboswitch 2H0Z 12!A:115!B U:C fS(sb:O2*-N3) [---][-] 7.34 168.18; 40.12 128.05 153.9 0.74 37.48
Riboswitch 2H0Z 12!A:29!B U:A WC [cWW][XX] 10.5 53.48; 53.57 0.09 -9.76 0.18 11.82
Riboswitch 2H0Z 13!A:28!B A:U WC [cWW][XX] 10.65 58.18; 54.71 3.48 -11.9 0.02 14.64
Riboswitch 2H0Z 14!A:27!B A:U WC [cWW][XX] 10.45 54.38; 57.08 2.7 -11.99 0.48 19.21
Riboswitch 2H0Z 15!A:26!B A:U WC [cWW][XX] 10.57 54.51; 56.21 1.7 -4.49 0.53 15.1
Riboswitch 2H0Z 16!A:25!B G:C WC [cWW][XIX] 10.67 56.2; 57.48 1.27 -3.49 0.08 9.65
Riboswitch 2H0Z 17!A:24!B C:G WC [cWW][XIX] 10.67 60.51; 53.19 7.33 -5.87 0.3 13.59
Riboswitch 2H0Z 18!A:23!B C:G Wb [---][-] 10.49 63.22; 49.37 13.85 0.11 0.16 7.27
Riboswitch 2H0Z 31!B:117!B G:A rS [tSS][-] 8.38 88.75; 58.75 30.0 160.69 0.92 21.19
Riboswitch 2H0Z 35!B:36!B A:C pS* [cHS][-] 6.85 145.71; 38.62 107.09 29.78 0.1 27.01
Riboswitch 2H0Z 36!B:105!B C:A rpS(sb:O2*-N3) [cSS][-] 5.48 135.39; 93.09 42.31 -82.72 0.51 59.97
Riboswitch 2H0Z 36!B:53!B C:G WC [cWW][XIX] 10.38 59.22; 54.04 5.18 0.33 0.19 11.22
Riboswitch 2H0Z 37!B:127!B G:A fS [tSW][X] 10.11 101.46; 46.88 54.59 108.67 0.97 66.56
Riboswitch 2H0Z 37!B:104!B G:A rpS(sb:O2*-N3) [---][-] 5.58 139.33; 89.39 49.94 -75.33 1.37 63.96
Riboswitch 2H0Z 37!B:52!B G:C WC [cWW][XIX] 10.52 54.06; 56.09 2.02 -9.64 0.13 8.34
Riboswitch 2H0Z 38!B:51!B A:U WC [cWW][XX] 10.27 57.88; 57.03 0.84 -11.81 0.07 14.58
Riboswitch 2H0Z 42!B:73!B C:G WC [cWW][XIX] 10.69 54.85; 53.25 1.6 -7.08 0.11 8.93
Riboswitch 2H0Z 43!B:72!B A:U WC [cWW][XX] 10.41 55.24; 56.39 1.14 -7.76 0.0 10.0
Riboswitch 2H0Z 44!B:71!B G:C WC [cWW][XIX] 10.53 53.23; 56.14 2.91 -5.41 0.04 14.56
Riboswitch 2H0Z 45!B:70!B G:C WC [cWW][XIX] 10.58 53.69; 52.5 1.19 -9.43 0.21 15.86
Riboswitch 2H0Z 46!B:69!B G:C WC [cWW][XIX] 10.44 57.5; 52.74 4.76 -13.7 0.57 27.57
Riboswitch 2H0Z 47!B:68!B U:G Wb [cWW][XXVIII] 10.76 64.43; 37.99 26.44 -7.0 0.36 16.26
Riboswitch 2H0Z 52!B:128!B C:G rpS [cSS][-] 5.5 131.43; 99.25 32.18 -91.45 0.0 57.72
Riboswitch 2H0Z 53!B:127!B G:A rpS(sb:O2*-N3) [---][-] 5.56 143.92; 86.51 57.41 -72.27 1.38 66.44
Riboswitch 2H0Z 53!B:104!B G:A fS [tSW][X] 9.7 100.44; 45.78 54.66 114.37 1.03 63.58
Riboswitch 2H0Z 54!B:106!B A:A rS(sb:O2*-N1)_1 [tSS][-] 7.66 94.3; 52.42 41.88 169.67 0.16 44.53
Riboswitch 2H0Z 54!B:59!B A:U rWC [tWW][XXI] 11.22 28.62; 41.53 12.91 -162.16 0.42 11.23
Riboswitch 2H0Z 74!B:90!B C:G WC [cWW][XIX] 10.64 54.46; 54.21 0.26 -6.36 0.24 13.25
Riboswitch 2H0Z 75!B:93!B G:A rS [tSS][-] 8.16 87.61; 55.55 32.06 149.26 1.33 46.51
Riboswitch 2H0Z 75!B:89!B G:C WC [cWW][XIX] 10.64 55.66; 54.09 1.57 -16.18 0.28 25.22
Riboswitch 2H0Z 76!B:88!B G:C WC [cWW][XIX] 10.53 53.01; 55.35 2.34 -10.04 0.51 6.25
Riboswitch 2H0Z 77!B:87!B U:A WC [cWW][XX] 10.54 56.18; 54.89 1.29 -11.26 0.01 14.56
Riboswitch 2H0Z 78!B:86!B C:G WC [cWW][XIX] 10.66 54.12; 52.26 1.86 -5.77 0.61 15.06
Riboswitch 2H0Z 79!B:81!B U:C H_2 [---][-] 9.19 91.96; 30.87 61.09 -37.9 2.05 45.82
Riboswitch 2H0Z 80!B:144!B U:A WC [cWW][XX] 10.69 53.46; 54.53 1.07 -11.88 0.5 19.13
Riboswitch 2H0Z 81!B:143!B C:G WC [cWW][XIX] 10.41 57.37; 53.78 3.59 -13.08 0.31 19.47
Riboswitch 2H0Z 82!B:142!B C:G WC [cWW][XIX] 10.39 57.4; 56.02 1.38 -8.16 0.03 9.94
Riboswitch 2H0Z 83!B:141!B U:A WC [cWW][XX] 10.53 52.93; 56.6 3.67 -5.79 0.08 9.31
Riboswitch 2H0Z 84!B:140!B G:C WC [cWW][XIX] 10.5 54.02; 54.04 0.02 -0.82 0.08 8.97
Riboswitch 2H0Z 85!B:139!B C:G WC [cWW][XIX] 10.43 56.94; 57.73 0.79 -6.51 0.09 16.27
Riboswitch 2H0Z 89!B:93!B C:A rpS(bs:O2-O2*) [cSS][-] 5.75 103.25; 146.76 43.5 -39.85 1.45 22.14
Riboswitch 2H0Z 90!B:91!B G:U pS* [cHS][-] 5.99 132.93; 53.81 79.11 52.55 0.77 47.35
Riboswitch 2H0Z 95!B:137!B A:G S [tSH][XI] 9.88 11.34; 92.92 81.58 -3.12 0.44 11.93
Riboswitch 2H0Z 96!B:136!B G:C WC [cWW][XIX] 10.59 58.16; 56.59 1.57 -2.06 0.01 7.46
Riboswitch 2H0Z 97!B:135!B G:C WC [cWW][XIX] 10.36 54.44; 59.76 5.32 2.32 0.07 4.18
Riboswitch 2H0Z 98!B:134!B A:U WC [cWW][XX] 10.6 52.73; 55.65 2.92 -4.37 0.05 9.36
Riboswitch 2H0Z 99!B:133!B C:G WC [cWW][XIX] 10.61 56.66; 56.21 0.45 -6.96 0.03 10.3
Riboswitch 2H0Z 100!B:132!B U:A WC [cWW][XX] 10.45 59.68; 54.16 5.52 -12.04 0.15 12.49
Riboswitch 2H0Z 101!B:131!B G:C WC [cWW][XIX] 10.6 59.72; 55.73 3.98 -13.94 0.62 22.53
Riboswitch 2H0Z 102!B:129!B G:A S_mo [tSH][XI] 10.36 79.49; 24.08 55.42 -179.02 0.8 12.52
Riboswitch 2H0Z 105!B:126!B A:U rH_1 [tWH][XXIV] 9.83 17.36; 31.95 14.59 169.08 0.13 4.03
Riboswitch 2H0Z 106!B:125!B A:A rH [tWH][V] 12.04 23.91; 23.19 0.73 129.68 0.01 19.42
Riboswitch 2H0Z 107!B:124!B A:C rH_1 [rWH][XXV] 11.2 4.55; 29.89 25.34 86.57 0.16 38.52
Riboswitch 2H0Z 108!B:123!B C:G WC [cWW][XIX] 10.72 50.94; 55.5 4.55 -8.23 0.32 20.95
Riboswitch 2H0Z 109!B:122!B C:G WC [cWW][XIX] 10.75 55.37; 50.36 5.01 -7.86 0.21 13.69
Riboswitch 2H0Z 110!B:121!B A:U WC [cWW][XX] 10.73 54.65; 53.55 1.1 -10.0 0.11 14.73
Riboswitch 2H0Z 111!B:120!B C:G WC [cWW][XIX] 10.74 54.91; 52.42 2.49 -5.26 0.24 12.7
Riboswitch 2H0Z 112!B:119!B A:U WC [cWW][XX] 10.15 58.57; 60.38 1.81 -3.57 0.05 7.16
Riboswitch 2H0Z 113!B:118!B G:C WC [cWW][XIX] 10.54 56.58; 58.73 2.15 4.23 0.3 1.78
Riboswitch 2H0Z 114!B:117!B G:A S_mo [tSH][XI] 10.12 86.12; 20.09 66.03 -149.79 0.11 15.48
Riboswitch 2H0Z 114!B:116!B G:G S(sb:O2*-N7)_1 [---][-] 7.56 84.0; 32.55 51.45 -170.79 2.67 27.43