Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2HO7 BPC Identified: 78 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2HO7 0!A:65!B A:G rS [tSS][-] 8.0 61.94; 86.87 24.93 151.3 1.18 38.93
Riboswitch 2HO7 2!A:64!B C:G WC [cWW][XIX] 10.8 54.46; 59.9 5.44 -2.35 0.07 6.16
Riboswitch 2HO7 3!A:63!B G:C WC [cWW][XIX] 10.45 49.0; 55.55 6.55 0.32 0.01 1.31
Riboswitch 2HO7 4!A:62!B C:G WC [cWW][XIX] 10.71 56.47; 54.64 1.83 -4.3 0.13 11.26
Riboswitch 2HO7 5!A:61!B C:G WC [cWW][XIX] 10.6 60.24; 52.1 8.14 12.17 0.22 10.44
Riboswitch 2HO7 7!A:60!B G:C WC [cWW][XIX] 10.68 58.0; 55.84 2.16 4.0 0.0 7.06
Riboswitch 2HO7 7!A:34!B G:G S_1 [tSH][-] 11.63 11.07; 83.65 72.58 38.18 0.56 12.64
Riboswitch 2HO7 8!A:58!B G:A rS [tSS][-] 8.17 91.31; 58.15 33.16 129.4 1.13 60.23
Riboswitch 2HO7 8!A:33!B G:U Wb [cWW][XXVIII] 11.06 36.06; 59.12 23.06 -4.18 0.84 27.51
Riboswitch 2HO7 9!A:32!B A:U WC [cWW][XX] 10.5 53.67; 53.8 0.13 -12.48 0.74 28.29
Riboswitch 2HO7 10!A:117!B C:A rpS(ss:O2*-O2*)_1 [cSS][-] 5.87 108.7; 146.4 37.7 -36.51 1.63 9.26
Riboswitch 2HO7 10!A:31!B C:G WC [cWW][XIX] 10.33 57.15; 53.38 3.77 -11.26 0.33 18.32
Riboswitch 2HO7 11!A:116!B U:G rpS [cSS][-] 5.56 150.98; 101.35 49.63 -54.97 0.81 32.85
Riboswitch 2HO7 11!A:30!B U:A WC [cWW][XX] 10.5 54.36; 55.26 0.9 -8.06 0.28 9.98
Riboswitch 2HO7 12!A:115!B U:C fS(sb:O2*-N3) [---][-] 7.45 162.76; 37.49 125.27 144.82 0.83 44.24
Riboswitch 2HO7 12!A:29!B U:A WC [cWW][XX] 10.19 58.82; 54.67 4.15 -5.94 0.02 10.5
Riboswitch 2HO7 13!A:28!B A:U WC [cWW][XX] 10.42 56.11; 56.76 0.65 -9.91 0.02 11.32
Riboswitch 2HO7 14!A:27!B A:U WC [cWW][XX] 10.13 61.01; 57.97 3.04 -11.96 0.44 18.53
Riboswitch 2HO7 15!A:26!B A:U WC [cWW][XX] 10.64 56.94; 54.17 2.78 -5.27 0.43 14.92
Riboswitch 2HO7 16!A:25!B G:C WC [cWW][XIX] 10.42 54.4; 59.41 5.0 -1.84 0.26 8.6
Riboswitch 2HO7 17!A:24!B C:G WC [cWW][XIX] 10.35 62.5; 50.24 12.26 -6.01 0.14 11.18
Riboswitch 2HO7 18!A:23!B C:G WC [cWW][XIX] 10.34 60.0; 56.0 4.01 2.08 0.07 4.54
Riboswitch 2HO7 31!B:117!B G:A rS [tSS][-] 8.15 87.85; 57.84 30.01 158.44 0.64 27.14
Riboswitch 2HO7 32!B:118!B U:C rS(ss:O2*-O2*) [---][-] 5.88 159.63; 157.59 2.03 -133.35 0.61 14.4
Riboswitch 2HO7 35!B:36!B A:C pS* [cHS][-] 6.71 142.2; 39.9 102.3 31.58 0.39 27.21
Riboswitch 2HO7 36!B:105!B C:A rpS(sb:O2*-N3) [cSS][-] 5.36 133.88; 96.11 37.76 -84.14 0.53 55.65
Riboswitch 2HO7 36!B:53!B C:G WC [cWW][XIX] 10.49 58.84; 53.05 5.79 -1.17 0.23 7.72
Riboswitch 2HO7 37!B:127!B G:A fS [tSW][X] 10.02 100.36; 47.49 52.87 108.04 0.63 64.73
Riboswitch 2HO7 37!B:104!B G:A rpS(sb:O2*-N3) [---][-] 5.64 139.39; 88.86 50.53 -74.16 0.89 62.76
Riboswitch 2HO7 37!B:52!B G:C WC [cWW][XIX] 10.48 52.91; 54.06 1.16 -7.84 0.11 8.79
Riboswitch 2HO7 38!B:51!B A:U WC [cWW][XX] 10.18 58.46; 54.7 3.77 -10.82 0.01 14.95
Riboswitch 2HO7 42!B:73!B C:G WC [cWW][XIX] 10.74 51.5; 54.33 2.83 -6.38 0.09 10.43
Riboswitch 2HO7 43!B:72!B A:U WC [cWW][XX] 10.33 60.24; 57.2 3.04 -11.19 0.15 13.67
Riboswitch 2HO7 44!B:71!B G:C WC [cWW][XIX] 10.58 58.26; 54.06 4.2 -4.12 0.11 9.13
Riboswitch 2HO7 45!B:70!B G:C WC [cWW][XIX] 10.52 55.83; 53.89 1.93 -4.49 0.16 9.2
Riboswitch 2HO7 46!B:69!B G:C WC [cWW][XIX] 10.77 52.78; 54.88 2.1 -9.95 0.41 20.4
Riboswitch 2HO7 47!B:68!B U:G Wb [cWW][XXVIII] 10.76 62.12; 37.19 24.94 -7.24 0.12 12.35
Riboswitch 2HO7 48!B:50!B U:A H_1 [cWH][XXIII] 7.81 70.66; 52.31 18.35 2.94 0.3 18.83
Riboswitch 2HO7 52!B:128!B C:G rpS [cSS][-] 5.51 130.48; 97.28 33.2 -90.09 0.13 57.09
Riboswitch 2HO7 53!B:127!B G:A rpS(sb:O2*-N3) [---][-] 5.59 141.91; 86.3 55.61 -74.94 1.49 66.61
Riboswitch 2HO7 53!B:104!B G:A fS [tSW][X] 9.88 100.72; 46.03 54.7 114.18 0.86 64.69
Riboswitch 2HO7 54!B:106!B A:A rS(sb:O2*-N1)_1 [tSS][-] 7.72 94.94; 54.85 40.09 169.78 0.45 36.95
Riboswitch 2HO7 54!B:59!B A:U rWC [tWW][XXI] 11.14 29.88; 42.06 12.18 -166.22 0.3 9.06
Riboswitch 2HO7 74!B:90!B C:G WC [cWW][XIX] 10.63 53.77; 53.88 0.11 -7.98 0.03 10.86
Riboswitch 2HO7 75!B:93!B G:A rS [tSS][-] 8.24 88.02; 56.51 31.51 144.96 1.5 51.06
Riboswitch 2HO7 75!B:89!B G:C WC [cWW][XIX] 10.66 56.53; 54.05 2.48 -16.01 0.18 23.39
Riboswitch 2HO7 76!B:88!B G:C WC [cWW][XIX] 10.71 54.93; 53.54 1.39 -8.96 0.02 10.61
Riboswitch 2HO7 77!B:87!B U:A WC [cWW][XX] 10.57 54.26; 51.73 2.53 -12.55 0.0 17.31
Riboswitch 2HO7 78!B:86!B C:G WC [cWW][XIX] 10.58 51.83; 50.77 1.06 -6.39 0.16 6.97
Riboswitch 2HO7 79!B:81!B U:C H_2 [---][-] 9.23 89.73; 34.04 55.69 -35.55 1.7 20.66
Riboswitch 2HO7 80!B:144!B U:A WC [cWW][XX] 10.96 50.15; 56.42 6.27 -14.64 0.22 25.31
Riboswitch 2HO7 81!B:143!B C:G WC [cWW][XIX] 10.7 53.16; 49.68 3.49 -10.03 0.19 10.78
Riboswitch 2HO7 82!B:142!B C:G WC [cWW][XIX] 10.5 51.99; 56.26 4.28 -11.32 0.13 12.41
Riboswitch 2HO7 83!B:141!B U:A WC [cWW][XX] 10.3 57.49; 56.24 1.24 -9.05 0.1 11.39
Riboswitch 2HO7 84!B:140!B G:C WC [cWW][XIX] 10.62 58.95; 53.91 5.04 -2.5 0.31 9.61
Riboswitch 2HO7 85!B:139!B C:G WC [cWW][XIX] 10.41 56.27; 57.74 1.47 -3.7 0.47 14.03
Riboswitch 2HO7 89!B:93!B C:A rpS(bs:O2-O2*) [cSS][-] 5.71 103.89; 145.48 41.58 -42.48 0.86 28.08
Riboswitch 2HO7 90!B:91!B G:U pS* [cHS][-] 6.23 134.55; 53.8 80.75 49.02 0.91 40.13
Riboswitch 2HO7 95!B:137!B A:G S [tSH][XI] 9.65 13.17; 100.65 87.47 1.46 0.01 5.01
Riboswitch 2HO7 96!B:136!B G:C WC [cWW][XIX] 10.4 57.72; 60.42 2.7 -7.02 0.02 9.86
Riboswitch 2HO7 97!B:135!B G:C WC [cWW][XIX] 10.43 54.47; 60.69 6.22 -5.54 0.24 12.71
Riboswitch 2HO7 98!B:134!B A:U WC [cWW][XX] 10.49 53.61; 60.1 6.49 -6.74 0.08 14.9
Riboswitch 2HO7 99!B:133!B C:G WC [cWW][XIX] 10.3 55.62; 53.59 2.02 -11.31 0.12 16.98
Riboswitch 2HO7 100!B:132!B U:A WC [cWW][XX] 10.24 55.75; 59.19 3.44 -10.45 0.14 10.1
Riboswitch 2HO7 101!B:131!B G:C WC [cWW][XIX] 10.58 54.03; 53.62 0.41 -13.22 0.44 21.58
Riboswitch 2HO7 102!B:129!B G:A S(bp:N1-O2P)_2 [---][-] 10.6 79.07; 28.59 50.48 -172.02 0.47 9.96
Riboswitch 2HO7 104!B:126!B A:U rH_1 [tWH][XXIV] 8.94 32.27; 32.74 0.46 -146.25 2.62 15.2
Riboswitch 2HO7 105!B:126!B A:U rH_1 [tWH][XXIV] 10.07 13.76; 32.98 19.21 170.93 0.25 2.98
Riboswitch 2HO7 106!B:125!B A:A rH [tWH][V] 12.07 19.36; 23.51 4.16 133.94 0.65 16.22
Riboswitch 2HO7 107!B:124!B A:C rH_1 [rWH][XXV] 11.05 8.19; 37.04 28.86 60.51 0.2 33.36
Riboswitch 2HO7 108!B:123!B C:G WC [cWW][XIX] 10.72 53.71; 55.75 2.04 -9.4 0.1 24.17
Riboswitch 2HO7 109!B:122!B C:G WC [cWW][XIX] 10.73 53.02; 55.29 2.27 -6.74 0.13 13.51
Riboswitch 2HO7 110!B:121!B A:U WC [cWW][XX] 10.41 55.59; 56.33 0.73 -7.97 0.04 5.69
Riboswitch 2HO7 111!B:120!B C:G WC [cWW][XIX] 10.61 51.89; 51.28 0.62 -4.55 0.15 18.38
Riboswitch 2HO7 112!B:119!B A:U WC [cWW][XX] 10.54 55.31; 55.56 0.25 -4.49 0.08 9.54
Riboswitch 2HO7 113!B:118!B G:C WC [cWW][XIX] 10.59 57.23; 57.9 0.68 1.8 0.29 4.07
Riboswitch 2HO7 114!B:117!B G:A S_mo [tSH][XI] 10.07 86.16; 22.18 63.99 -149.2 0.59 28.12
Riboswitch 2HO7 114!B:116!B G:G S(sb:O2*-N7)_1 [---][-] 7.34 81.15; 33.1 48.06 -176.18 2.59 29.64