Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2HOK BPC Identified: 41 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2HOK 9!A:90!A G:C WC [cWW][XIX] 10.63 57.02; 52.22 4.8 -15.24 0.16 20.26
Riboswitch 2HOK 10!A:89!A C:G WC [cWW][XIX] 10.57 54.59; 52.81 1.79 -10.9 0.01 14.62
Riboswitch 2HOK 11!A:88!A G:C WC [cWW][XIX] 10.27 54.95; 56.15 1.2 -6.98 0.05 20.76
Riboswitch 2HOK 12!A:87!A A:U WC [cWW][XX] 10.4 56.45; 50.93 5.52 -5.42 0.2 9.53
Riboswitch 2HOK 13!A:86!A C:G WC [cWW][XIX] 10.68 54.33; 52.63 1.69 -9.79 0.12 17.17
Riboswitch 2HOK 14!A:85!A U:A WC [cWW][XX] 10.02 60.9; 67.88 6.98 -10.3 0.58 19.45
Riboswitch 2HOK 15!A:51!A C:G WC [cWW][XIX] 10.58 52.41; 59.68 7.27 -6.71 0.19 11.11
Riboswitch 2HOK 16!A:84!A G:A rpS [cSS][-] 6.2 115.97; 137.65 21.67 -26.08 0.64 11.04
Riboswitch 2HOK 16!A:50!A G:C WC [cWW][XIX] 10.55 60.61; 57.5 3.1 -7.84 0.04 12.49
Riboswitch 2HOK 17!A:56!A G:A rS [tSS][-] 8.21 84.58; 52.83 31.75 174.09 0.57 20.87
Riboswitch 2HOK 17!A:49!A G:C WC [cWW][XIX] 10.42 52.91; 60.64 7.73 -6.92 0.01 10.23
Riboswitch 2HOK 18!A:57!A G:C rS(ss:O2*-O2*) [---][-] 5.13 155.14; 144.82 10.32 -85.67 2.3 38.77
Riboswitch 2HOK 18!A:48!A G:C WC [cWW][XIX] 10.85 46.95; 52.83 5.89 -12.83 0.95 24.92
Riboswitch 2HOK 19!A:47!A G:A WC [cWW][VIII] 13.25 41.58; 40.83 0.74 -11.74 0.49 15.76
Riboswitch 2HOK 19!A:42!A G:G rS [tSS][IV] 8.31 78.22; 78.41 0.18 -163.76 0.78 23.02
Riboswitch 2HOK 20!A:45!A U:A WC [cWW][XX] 10.07 62.47; 53.03 9.45 9.47 0.32 25.46
Riboswitch 2HOK 21!A:71!A G:U rpS [cSS][-] 6.86 100.27; 120.32 20.05 -48.53 0.78 38.51
Riboswitch 2HOK 21!A:38!A G:C WC [cWW][XIX] 10.67 48.28; 53.16 4.87 -7.0 0.01 15.38
Riboswitch 2HOK 22!A:70!A C:A rpS(sb:O2*-N3) [cSS][-] 5.21 141.87; 96.83 45.04 -74.55 0.78 47.78
Riboswitch 2HOK 22!A:37!A C:G WC [cWW][XIX] 10.35 62.46; 54.3 8.16 -8.27 0.39 12.14
Riboswitch 2HOK 23!A:36!A C:G WC [cWW][XIX] 10.3 61.79; 54.04 7.75 -5.54 0.11 10.39
Riboswitch 2HOK 24!A:35!A C:A Wb [cWW][-] 11.31 57.25; 27.28 29.98 -6.2 0.14 6.72
Riboswitch 2HOK 37!A:69!A G:A fS [tSW][X] 10.47 111.95; 36.47 75.48 83.88 0.37 63.9
Riboswitch 2HOK 39!A:43!A U:A rH_1 [tWH][XXIV] 10.09 35.25; 13.86 21.39 -174.46 0.08 12.76
Riboswitch 2HOK 40!A:43!A G:A S(bp:N1-O2P)_1 [---][-] 8.79 60.55; 34.85 25.7 -94.8 2.53 31.94
Riboswitch 2HOK 41!A:48!A A:C rpS(sb:O2*-N3) [cSS][-] 5.68 101.9; 153.8 51.9 -35.09 1.19 28.15
Riboswitch 2HOK 49!A:56!A C:A rpS(ss:O2*-O2*)_1 [cSS][-] 5.55 112.13; 149.4 37.27 2.4 0.24 23.32
Riboswitch 2HOK 50!A:84!A C:A fS(sb:O2*-N1)_1 [tSS][-] 8.72 93.47; 52.25 41.22 161.92 0.98 22.37
Riboswitch 2HOK 53!A:84!A A:A rS* [tHH][-] 11.32 16.44; 15.97 0.46 73.08 0.16 26.36
Riboswitch 2HOK 56!A:83!A A:G S [tSH][XI] 9.84 2.04; 94.15 92.11 152.28 0.97 21.11
Riboswitch 2HOK 57!A:82!A C:G Wb [---][-] 10.78 60.12; 47.23 12.9 -7.0 0.43 13.01
Riboswitch 2HOK 58!A:81!A C:G WC [cWW][XIX] 10.33 55.12; 47.81 7.31 -4.64 0.06 7.66
Riboswitch 2HOK 59!A:80!A U:A WC [cWW][XX] 10.63 58.76; 51.61 7.15 -12.45 1.06 27.88
Riboswitch 2HOK 60!A:78!A G:G H_1 [cWH][VI] 11.56 61.41; 23.79 37.63 1.82 0.27 13.38
Riboswitch 2HOK 61!A:77!A A:C rWC_Mo [---][-] 10.75 12.74; 79.36 66.62 157.06 0.17 22.3
Riboswitch 2HOK 63!A:76!A C:G WC [cWW][XIX] 10.54 56.29; 50.52 5.77 -11.02 0.17 20.72
Riboswitch 2HOK 64!A:75!A U:A WC [cWW][XX] 10.68 57.42; 59.03 1.61 -11.98 0.04 17.12
Riboswitch 2HOK 65!A:74!A G:C WC [cWW][XIX] 10.68 59.61; 53.01 6.59 10.34 0.33 15.03
Riboswitch 2HOK 66!A:73!A G:C WC [cWW][XIX] 10.56 58.44; 50.02 8.42 2.52 0.3 11.24
Riboswitch 2HOK 68!A:71!A U:U S(bp:N3-O2P) [---][-] 8.58 83.13; 30.97 52.17 -159.77 1.22 5.51
Riboswitch 2HOK 68!A:70!A U:A S(sb:O2*-N7) [---][-] 6.63 83.11; 45.56 37.54 -178.93 1.79 22.09