Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2HOL BPC Identified: 40 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2HOL 9!A:90!A G:C WC [cWW][XIX] 10.69 53.45; 54.98 1.53 -15.49 0.09 15.68
Riboswitch 2HOL 10!A:89!A C:G WC [cWW][XIX] 10.66 51.73; 54.41 2.68 -12.89 0.24 20.49
Riboswitch 2HOL 11!A:88!A G:C WC [cWW][XIX] 10.59 53.51; 54.44 0.92 -5.16 0.05 5.94
Riboswitch 2HOL 12!A:87!A A:U WC [cWW][XX] 10.66 56.5; 53.01 3.49 -11.51 0.17 17.5
Riboswitch 2HOL 13!A:86!A C:G WC [cWW][XIX] 10.63 57.93; 52.17 5.76 -15.56 0.02 18.15
Riboswitch 2HOL 14!A:85!A U:A WC [cWW][XX] 10.22 63.0; 61.43 1.57 -10.46 0.18 15.62
Riboswitch 2HOL 15!A:51!A C:G WC [cWW][XIX] 10.62 51.83; 54.43 2.6 -9.13 0.13 14.64
Riboswitch 2HOL 16!A:84!A G:A rpS [cSS][-] 5.79 113.23; 143.52 30.29 -17.37 0.25 11.61
Riboswitch 2HOL 16!A:50!A G:C WC [cWW][XIX] 10.38 56.54; 56.39 0.15 -8.43 0.04 10.45
Riboswitch 2HOL 17!A:56!A G:A rS [tSS][-] 8.01 88.23; 57.69 30.54 176.75 0.11 24.31
Riboswitch 2HOL 17!A:49!A G:C WC [cWW][XIX] 10.31 54.16; 60.0 5.84 -8.84 0.26 14.8
Riboswitch 2HOL 18!A:48!A G:C WC [cWW][XIX] 10.74 51.6; 51.78 0.18 -17.04 0.44 22.37
Riboswitch 2HOL 19!A:47!A G:A WC [cWW][VIII] 12.98 40.07; 47.39 7.32 -13.88 0.17 19.11
Riboswitch 2HOL 19!A:42!A G:G rS [tSS][IV] 8.24 75.96; 74.44 1.51 -167.86 0.59 21.55
Riboswitch 2HOL 20!A:45!A U:A WC [cWW][XX] 10.47 59.68; 51.28 8.39 12.22 0.77 25.87
Riboswitch 2HOL 21!A:71!A G:U rpS [cSS][-] 7.21 96.58; 121.74 25.16 -44.16 0.94 37.24
Riboswitch 2HOL 21!A:38!A G:C WC [cWW][XIX] 11.01 45.46; 54.79 9.32 -3.33 0.04 13.52
Riboswitch 2HOL 22!A:70!A C:A rpS(sb:O2*-N3) [cSS][-] 5.65 137.89; 97.83 40.06 -76.1 0.82 49.66
Riboswitch 2HOL 22!A:37!A C:G WC [cWW][XIX] 10.56 62.35; 51.7 10.65 -1.6 0.23 7.37
Riboswitch 2HOL 23!A:36!A C:G WC [cWW][XIX] 10.33 62.88; 53.19 9.69 -5.27 0.17 13.39
Riboswitch 2HOL 24!A:35!A C:A sWb [---][-] 10.24 85.17; 32.18 52.99 -3.21 0.25 8.55
Riboswitch 2HOL 25!A:36!A U:G S*_1 [tHS][-] 10.57 23.8; 102.16 78.36 55.96 0.49 72.58
Riboswitch 2HOL 37!A:69!A G:A fS [tSW][X] 10.07 110.62; 39.92 70.7 96.46 0.89 65.8
Riboswitch 2HOL 39!A:43!A U:A rH_1 [tWH][XXIV] 9.66 33.68; 15.98 17.7 -162.54 0.24 17.4
Riboswitch 2HOL 41!A:48!A A:C rpS(sb:O2*-N3) [cSS][-] 5.82 100.21; 149.1 48.89 -39.66 1.26 28.18
Riboswitch 2HOL 49!A:56!A C:A rpS(ss:O2*-O2*)_1 [cSS][-] 5.8 110.13; 152.71 42.58 -15.66 1.56 27.89
Riboswitch 2HOL 50!A:84!A C:A fS(sb:O2*-N1)_1 [tSS][-] 8.68 90.09; 55.62 34.47 163.51 1.06 21.97
Riboswitch 2HOL 53!A:84!A A:A rS* [tHH][-] 11.33 25.1; 17.31 7.79 60.88 0.25 31.23
Riboswitch 2HOL 56!A:83!A A:G S [tSH][XI] 9.47 3.14; 91.29 88.15 -122.92 1.32 24.5
Riboswitch 2HOL 57!A:82!A C:G WC [cWW][XIX] 10.57 60.24; 48.61 11.63 -12.16 0.63 26.49
Riboswitch 2HOL 58!A:81!A C:G WC [cWW][XIX] 10.46 52.91; 49.45 3.46 -11.36 0.16 10.71
Riboswitch 2HOL 59!A:80!A U:A WC [cWW][XX] 10.57 56.87; 51.58 5.3 -11.2 0.68 17.0
Riboswitch 2HOL 60!A:78!A G:G H_1 [cWH][VI] 11.79 57.96; 24.28 33.68 -0.1 0.08 8.31
Riboswitch 2HOL 61!A:77!A A:C rWC_Mo [---][-] 10.8 11.12; 81.59 70.47 176.97 0.38 17.13
Riboswitch 2HOL 63!A:76!A C:G WC [cWW][XIX] 10.63 57.41; 52.46 4.95 -12.2 0.41 16.43
Riboswitch 2HOL 64!A:75!A U:A WC [cWW][XX] 10.51 54.02; 62.63 8.61 -7.09 0.04 16.58
Riboswitch 2HOL 65!A:74!A G:C WC [cWW][XIX] 10.44 54.93; 57.3 2.37 -0.32 0.02 4.96
Riboswitch 2HOL 66!A:73!A G:C WC [cWW][XIX] 10.37 53.93; 56.8 2.87 -2.9 0.14 18.04
Riboswitch 2HOL 68!A:71!A U:U S(bp:N3-O2P) [---][-] 8.61 79.13; 29.61 49.52 -156.63 1.06 13.43
Riboswitch 2HOL 68!A:70!A U:A S(sb:O2*-N7) [---][-] 6.58 79.28; 42.46 36.82 -174.71 0.82 28.14