Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2HOP BPC Identified: 32 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 2HOP 9!A:90!A G:C WC [cWW][XIX] 10.2 61.73; 49.84 11.9 -10.88 0.47 30.67
Riboswitch 2HOP 10!A:89!A C:G WC [cWW][XIX] 10.77 42.5; 57.76 15.26 -16.7 0.08 23.47
Riboswitch 2HOP 11!A:88!A G:C WC [cWW][XIX] 10.71 53.75; 51.3 2.45 -1.7 0.34 11.57
Riboswitch 2HOP 12!A:87!A A:U WC [cWW][XX] 10.33 53.7; 57.42 3.72 -13.64 1.49 35.41
Riboswitch 2HOP 13!A:86!A C:G WC [cWW][XIX] 10.43 51.52; 56.83 5.32 -12.87 0.53 27.99
Riboswitch 2HOP 14!A:85!A U:A WC [cWW][XX] 9.9 61.96; 60.1 1.86 -12.22 0.7 31.85
Riboswitch 2HOP 15!A:51!A C:G WC [cWW][XIX] 10.5 47.53; 55.03 7.49 -4.0 0.8 24.83
Riboswitch 2HOP 16!A:84!A G:A rpS [cSS][-] 5.65 112.54; 148.16 35.62 -19.68 1.15 4.85
Riboswitch 2HOP 16!A:50!A G:C WC [cWW][XIX] 10.47 58.02; 52.64 5.38 -7.34 0.36 26.89
Riboswitch 2HOP 17!A:56!A G:A rS [tSS][-] 8.73 86.18; 47.8 38.38 -175.61 0.41 24.13
Riboswitch 2HOP 17!A:49!A G:C WC [cWW][XIX] 10.32 53.26; 56.37 3.11 -17.44 0.08 23.14
Riboswitch 2HOP 18!A:57!A G:C rS(ss:O2*-O2*) [---][-] 5.16 163.46; 156.87 6.59 -41.81 2.33 33.47
Riboswitch 2HOP 18!A:48!A G:C WC [cWW][XIX] 10.61 47.82; 57.27 9.45 -26.4 0.43 30.5
Riboswitch 2HOP 19!A:47!A G:A WC [cWW][VIII] 12.55 46.52; 44.1 2.43 -22.25 0.75 14.65
Riboswitch 2HOP 19!A:42!A G:G rS [tSS][IV] 7.71 83.83; 68.6 15.23 175.28 0.51 11.44
Riboswitch 2HOP 20!A:45!A U:A Wb* [---][-] 8.08 66.92; 87.42 20.5 17.48 0.88 39.1
Riboswitch 2HOP 21!A:38!A G:C Wb [---][-] 10.62 34.1; 58.2 24.11 -1.99 0.15 12.09
Riboswitch 2HOP 22!A:37!A C:G WC [cWW][XIX] 10.82 50.94; 51.51 0.57 -1.79 0.83 23.18
Riboswitch 2HOP 23!A:36!A C:G WC [cWW][XIX] 9.86 52.39; 64.48 12.1 -17.57 0.48 53.32
Riboswitch 2HOP 24!A:35!A C:A Wb [cWW][-] 11.67 56.52; 28.96 27.56 -8.12 0.47 31.34
Riboswitch 2HOP 39!A:73!A U:C rS(ss:O2*-O2*) [---][-] 4.55 133.88; 168.53 34.65 -45.32 2.52 36.41
Riboswitch 2HOP 39!A:43!A U:A rH_1 [tWH][XXIV] 9.78 30.15; 11.58 18.58 -160.71 0.06 6.8
Riboswitch 2HOP 41!A:48!A A:C rpS(sb:O2*-N3) [cSS][-] 6.01 97.46; 149.63 52.17 -44.77 1.39 29.5
Riboswitch 2HOP 50!A:84!A C:A fS(sb:O2*-N1)_1 [tSS][-] 8.55 85.19; 56.71 28.48 168.16 1.37 31.39
Riboswitch 2HOP 56!A:83!A A:G S [tSH][XI] 10.02 8.86; 80.22 71.37 100.51 0.35 9.39
Riboswitch 2HOP 57!A:82!A C:G WC [cWW][XIX] 10.01 61.8; 50.66 11.15 -17.97 0.16 31.31
Riboswitch 2HOP 58!A:81!A C:G WC [cWW][XIX] 10.11 54.7; 58.23 3.53 -2.24 0.33 3.87
Riboswitch 2HOP 59!A:80!A U:A WC [cWW][XX] 11.23 46.4; 39.17 7.23 -4.81 0.46 21.82
Riboswitch 2HOP 64!A:75!A U:A WC [cWW][XX] 9.74 53.67; 65.27 11.59 5.48 0.47 29.85
Riboswitch 2HOP 65!A:74!A G:C Wb [---][-] 10.59 47.05; 70.62 23.57 17.08 1.2 17.92
Riboswitch 2HOP 66!A:73!A G:C Wb* [---][-] 11.82 70.62; 46.66 23.96 18.8 0.27 29.76
Riboswitch 2HOP 67!A:73!A A:C WC [---][-] 10.23 49.59; 59.74 10.15 -17.67 0.68 30.61