Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2I82
BPC Identified: 32
Ambiguities: 0
tRNA |
2I82 |
1201!E:1221!E |
G:C |
WC [cWW][XIX] |
10.53 |
53.59; 59.94 |
6.35 |
-0.94 |
0.31 |
8.53 |
tRNA |
2I82 |
1202!E:1220!E |
A:U |
WC [cWW][XX] |
10.37 |
55.84; 55.03 |
0.82 |
-10.09 |
0.0 |
12.09 |
tRNA |
2I82 |
1203!E:1219!E |
G:C |
WC [cWW][XIX] |
10.51 |
54.46; 55.38 |
0.92 |
-4.62 |
0.05 |
8.44 |
tRNA |
2I82 |
1204!E:1218!E |
G:C |
WC [cWW][XIX] |
10.51 |
55.01; 55.36 |
0.35 |
-3.93 |
0.02 |
13.21 |
tRNA |
2I82 |
1205!E:1217!E |
G:C |
WC [cWW][XIX] |
10.36 |
57.73; 54.22 |
3.51 |
-11.7 |
0.57 |
26.95 |
tRNA |
2I82 |
1206!E:1216!E |
G:C |
WC [cWW][XIX] |
10.8 |
50.97; 51.08 |
0.12 |
-8.49 |
0.94 |
23.96 |
tRNA |
2I82 |
1207!E:1215!E |
A:U |
WC_mo [cWW][XX] |
13.51 |
31.95; 25.69 |
6.26 |
24.14 |
0.36 |
7.53 |
tRNA |
2I82 |
1209!E:1212!E |
U:A |
rH_1 [tWH][XXIV] |
9.33 |
36.69; 15.98 |
20.71 |
-153.99 |
0.19 |
18.06 |
tRNA |
2I82 |
1301!F:1321!F |
G:C |
WC [cWW][XIX] |
10.65 |
55.44; 56.05 |
0.62 |
-3.48 |
0.33 |
9.34 |
tRNA |
2I82 |
1302!F:1320!F |
A:U |
WC [cWW][XX] |
10.27 |
56.25; 56.69 |
0.44 |
-7.62 |
0.02 |
10.13 |
tRNA |
2I82 |
1303!F:1319!F |
G:C |
WC [cWW][XIX] |
10.71 |
55.73; 55.1 |
0.64 |
-6.91 |
0.02 |
11.83 |
tRNA |
2I82 |
1304!F:1318!F |
G:C |
WC [cWW][XIX] |
10.54 |
56.64; 53.86 |
2.78 |
-7.14 |
0.26 |
14.72 |
tRNA |
2I82 |
1305!F:1317!F |
G:C |
WC [cWW][XIX] |
10.53 |
55.63; 53.49 |
2.14 |
-12.69 |
0.49 |
23.84 |
tRNA |
2I82 |
1306!F:1316!F |
G:C |
WC [cWW][XIX] |
10.69 |
52.09; 51.29 |
0.8 |
-13.49 |
0.81 |
23.29 |
tRNA |
2I82 |
1307!F:1315!F |
A:U |
WC_mo [cWW][XX] |
13.38 |
33.67; 27.95 |
5.73 |
24.61 |
0.34 |
9.11 |
tRNA |
2I82 |
1309!F:1312!F |
U:A |
rH_1 [tWH][XXIV] |
9.37 |
36.52; 16.54 |
19.98 |
-158.05 |
0.38 |
21.11 |
tRNA |
2I82 |
1401!G:1421!G |
G:C |
WC [cWW][XIX] |
10.43 |
50.91; 54.95 |
4.04 |
-5.9 |
0.14 |
5.49 |
tRNA |
2I82 |
1402!G:1420!G |
A:U |
WC [cWW][XX] |
10.55 |
55.56; 50.86 |
4.69 |
-10.09 |
0.15 |
10.32 |
tRNA |
2I82 |
1403!G:1419!G |
G:C |
WC [cWW][XIX] |
10.51 |
56.75; 55.79 |
0.96 |
-4.03 |
0.04 |
8.54 |
tRNA |
2I82 |
1404!G:1418!G |
G:C |
WC [cWW][XIX] |
10.58 |
55.36; 59.3 |
3.94 |
-4.56 |
0.29 |
10.53 |
tRNA |
2I82 |
1405!G:1417!G |
G:C |
WC [cWW][XIX] |
10.4 |
54.88; 56.15 |
1.28 |
-11.18 |
0.28 |
16.57 |
tRNA |
2I82 |
1406!G:1416!G |
G:C |
WC [cWW][XIX] |
10.97 |
51.1; 49.91 |
1.19 |
-10.97 |
0.06 |
14.85 |
tRNA |
2I82 |
1407!G:1415!G |
A:U |
WC_mo [cWW][XX] |
13.59 |
34.38; 30.92 |
3.46 |
20.83 |
0.28 |
9.92 |
tRNA |
2I82 |
1409!G:1412!G |
U:A |
rH_1 [tWH][XXIV] |
9.53 |
40.63; 12.5 |
28.13 |
-145.62 |
0.01 |
15.53 |
tRNA |
2I82 |
1501!H:1521!H |
G:C |
WC [cWW][XIX] |
10.37 |
54.31; 60.71 |
6.4 |
-7.09 |
0.01 |
8.92 |
tRNA |
2I82 |
1502!H:1520!H |
A:U |
WC [cWW][XX] |
10.5 |
53.84; 51.67 |
2.16 |
-13.27 |
0.03 |
14.42 |
tRNA |
2I82 |
1503!H:1519!H |
G:C |
WC [cWW][XIX] |
10.54 |
57.51; 55.43 |
2.08 |
-6.09 |
0.04 |
11.02 |
tRNA |
2I82 |
1504!H:1518!H |
G:C |
WC [cWW][XIX] |
10.46 |
55.03; 56.68 |
1.66 |
-2.31 |
0.03 |
14.03 |
tRNA |
2I82 |
1505!H:1517!H |
G:C |
WC [cWW][XIX] |
10.41 |
58.03; 56.63 |
1.4 |
-11.09 |
0.6 |
24.91 |
tRNA |
2I82 |
1506!H:1516!H |
G:C |
WC [cWW][XIX] |
10.72 |
51.89; 53.85 |
1.97 |
-8.2 |
0.26 |
17.46 |
tRNA |
2I82 |
1507!H:1515!H |
A:U |
WC_mo [cWW][XX] |
13.45 |
34.25; 28.4 |
5.85 |
24.53 |
0.22 |
11.24 |
tRNA |
2I82 |
1509!H:1512!H |
U:A |
rH_1 [tWH][XXIV] |
9.55 |
40.25; 13.62 |
26.62 |
-152.35 |
0.15 |
16.52 |