Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2JLT
BPC Identified: 17
Ambiguities: 0
RNA_aptamer |
2JLT |
1!A:18!A |
G:C |
WC [cWW][XIX] |
10.64 |
57.48; 50.62 |
6.86 |
-2.48 |
0.3 |
1.99 |
RNA_aptamer |
2JLT |
2!A:17!A |
G:C |
WC [cWW][XIX] |
10.48 |
53.85; 60.95 |
7.1 |
-12.46 |
0.13 |
17.56 |
RNA_aptamer |
2JLT |
3!A:16!A |
U:A |
WC [cWW][XX] |
10.65 |
45.78; 58.95 |
13.17 |
-11.2 |
0.04 |
16.73 |
RNA_aptamer |
2JLT |
4!A:15!A |
C:G |
WC [cWW][XIX] |
10.51 |
53.56; 55.92 |
2.36 |
-14.69 |
0.04 |
20.41 |
RNA_aptamer |
2JLT |
5!A:14!A |
G:C |
WC [cWW][XIX] |
10.64 |
54.39; 54.66 |
0.27 |
-11.74 |
0.55 |
23.31 |
RNA_aptamer |
2JLT |
6!A:13!A |
G:A |
WC [cWW][VIII] |
12.74 |
47.68; 46.29 |
1.39 |
-5.32 |
0.28 |
21.64 |
RNA_aptamer |
2JLT |
7!A:11!B |
U:A |
WC [cWW][XX] |
10.4 |
54.67; 57.61 |
2.94 |
5.67 |
0.59 |
15.85 |
RNA_aptamer |
2JLT |
8!A:10!B |
C:G |
WC [cWW][XIX] |
10.36 |
57.63; 54.02 |
3.61 |
-0.39 |
0.26 |
7.58 |
RNA_aptamer |
2JLT |
9!A:9!B |
C:G |
WC [cWW][XIX] |
10.48 |
59.09; 57.31 |
1.79 |
0.95 |
0.15 |
5.22 |
RNA_aptamer |
2JLT |
10!A:8!B |
C:G |
WC [cWW][XIX] |
10.61 |
56.52; 55.48 |
1.04 |
0.37 |
0.08 |
2.09 |
RNA_aptamer |
2JLT |
11!A:7!B |
A:U |
WC [cWW][XX] |
10.46 |
56.58; 55.44 |
1.14 |
-7.07 |
0.43 |
7.42 |
RNA_aptamer |
2JLT |
12!A:6!B |
G:C |
WC [cWW][XIX] |
10.81 |
52.83; 50.7 |
2.13 |
-9.13 |
0.24 |
14.89 |
RNA_aptamer |
2JLT |
1!B:16!B |
G:C |
WC [cWW][XIX] |
10.48 |
57.25; 54.36 |
2.89 |
-3.39 |
0.08 |
6.09 |
RNA_aptamer |
2JLT |
2!B:15!B |
G:C |
WC [cWW][XIX] |
10.42 |
54.18; 58.51 |
4.33 |
-6.91 |
0.04 |
9.91 |
RNA_aptamer |
2JLT |
3!B:14!B |
A:U |
WC [cWW][XX] |
10.53 |
58.13; 50.52 |
7.6 |
-4.66 |
0.23 |
15.32 |
RNA_aptamer |
2JLT |
4!B:13!B |
G:C |
WC [cWW][XIX] |
10.57 |
54.82; 56.92 |
2.1 |
-1.22 |
0.1 |
7.24 |
RNA_aptamer |
2JLT |
5!B:12!B |
C:G |
WC [cWW][XIX] |
10.6 |
56.17; 56.02 |
0.16 |
7.09 |
0.33 |
9.61 |