Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2NR0 BPC Identified: 109 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2NR0 5!E:68!E A:U WC [cWW][XX] 10.75 56.18; 62.12 5.94 -0.27 1.07 10.75
tRNA 2NR0 6!E:67!E G:C WC [cWW][XIX] 11.0 63.16; 53.26 9.91 -10.36 0.65 30.05
tRNA 2NR0 7!E:66!E G:C WC [cWW][XIX] 11.71 47.46; 46.35 1.11 -19.51 0.09 20.28
tRNA 2NR0 8!E:14!E U:A rH_1 [tWH][XXIV] 9.29 47.06; 20.84 26.22 -169.79 0.48 16.05
tRNA 2NR0 10!E:25!E G:C WC [cWW][XIX] 10.66 56.03; 51.38 4.65 -6.28 0.31 12.19
tRNA 2NR0 11!E:24!E U:A WC [cWW][XX] 10.13 52.63; 60.0 7.37 4.59 0.09 10.13
tRNA 2NR0 12!E:23!E G:C WC [cWW][XIX] 10.36 57.23; 57.74 0.52 2.08 0.2 6.71
tRNA 2NR0 13!E:22!E G:A S [tSH][XI] 9.71 96.68; 10.44 86.25 -23.07 0.59 23.02
tRNA 2NR0 13!E:21!E G:G pfS(sb:O2*-N2)_1 [---][-] 9.27 50.04; 143.22 93.18 -13.76 1.47 10.76
tRNA 2NR0 14!E:20A!E A:A pfS [cSW][-] 9.34 34.41; 122.81 88.39 -22.11 0.86 17.12
tRNA 2NR0 15!E:48!E A:U rWC [tWW][XXI] 10.84 30.33; 56.3 25.96 144.48 0.21 21.23
tRNA 2NR0 18!E:55!E G:U fS_1 [tSW][-] 9.32 27.95; 96.48 68.52 158.0 1.15 11.01
tRNA 2NR0 19!E:56!E G:C WC [cWW][XIX] 11.05 59.85; 52.01 7.84 -12.87 1.65 39.22
tRNA 2NR0 20A!E:47!E A:U rH_1 [tWH][XXIV] 10.15 8.6; 41.65 33.05 -105.08 1.08 68.06
tRNA 2NR0 26!E:44!E G:U Wb [cWW][XXVIII] 10.14 46.55; 67.83 21.28 -21.77 0.1 30.83
tRNA 2NR0 27!E:43!E C:G WC [cWW][XIX] 10.78 48.65; 51.15 2.49 -10.13 0.19 21.14
tRNA 2NR0 28!E:42!E U:A WC [cWW][XX] 10.59 51.77; 55.75 3.98 -5.96 0.44 4.97
tRNA 2NR0 29!E:41!E A:U WC [cWW][XX] 11.16 57.87; 50.71 7.16 -1.01 0.08 7.98
tRNA 2NR0 30!E:40!E C:G WC [cWW][XIX] 10.97 60.74; 53.5 7.24 -1.43 0.17 3.57
tRNA 2NR0 31!E:39!E C:G WC [cWW][XIX] 10.51 58.94; 53.0 5.94 7.19 1.11 24.34
tRNA 2NR0 45A!E:46L!E G:C WC [cWW][XIX] 10.63 56.67; 48.23 8.44 -10.99 0.16 9.41
tRNA 2NR0 45B!E:46K!E C:G WC [cWW][XIX] 10.43 60.33; 60.88 0.55 -8.19 0.15 14.32
tRNA 2NR0 45C!E:46J!E C:G WC [cWW][XIX] 11.17 50.85; 50.61 0.25 -0.14 0.87 9.38
tRNA 2NR0 45D!E:46I!E C:G WC [cWW][XIX] 10.92 61.43; 48.19 13.24 -0.99 0.65 10.28
tRNA 2NR0 49!E:65!E A:U WC [cWW][XX] 10.63 52.33; 56.62 4.28 -3.33 0.17 13.95
tRNA 2NR0 50!E:64!E C:G WC [cWW][XIX] 11.0 49.05; 54.11 5.06 -12.07 0.11 17.52
tRNA 2NR0 51!E:63!E G:C WC [cWW][XIX] 11.06 45.82; 50.41 4.59 -4.52 0.26 10.09
tRNA 2NR0 52!E:62!E G:C WC [cWW][XIX] 10.82 53.0; 52.49 0.51 -1.1 0.23 16.84
tRNA 2NR0 53!E:61!E G:C WC [cWW][XIX] 10.84 56.57; 49.07 7.5 12.03 0.26 16.48
tRNA 2NR0 54!E:58!E U:A rH_1 [tWH][XXIV] 9.47 35.52; 16.13 19.39 175.83 0.11 10.71
tRNA 2NR0 4!F:69!F G:C WC [cWW][XIX] 9.89 54.57; 65.68 11.1 -1.76 0.86 17.72
tRNA 2NR0 5!F:68!F A:U WC [cWW][XX] 9.54 73.24; 60.94 12.3 -1.46 0.85 6.43
tRNA 2NR0 6!F:67!F G:C WC [cWW][XIX] 10.64 50.38; 52.15 1.77 -14.31 0.35 17.02
tRNA 2NR0 7!F:66!F G:C WC [cWW][XIX] 11.17 52.12; 50.72 1.4 -6.54 0.43 15.99
tRNA 2NR0 8!F:14!F U:A rH_2 [---][-] 10.85 26.51; 16.54 9.97 106.89 0.07 24.43
tRNA 2NR0 9!F:12!F G:G rpS* [cHH][-] 11.53 21.14; 36.92 15.78 1.49 0.82 17.69
tRNA 2NR0 10!F:25!F G:C WC [cWW][XIX] 10.43 58.38; 51.44 6.94 18.01 0.32 19.15
tRNA 2NR0 11!F:24!F* U:A WC [cWW][XX]; Wb* [---][-] 10.46 50.21; 63.19 12.98 -4.03 0.21 8.77
tRNA 2NR0 12!F:23!F G:C WC [cWW][XIX] 11.12 47.03; 47.33 0.3 -15.14 0.05 31.92
tRNA 2NR0 13!F:21!F G:G pfS_1 [cSW][-] 10.0 64.17; 117.22 53.05 -12.84 0.27 21.01
tRNA 2NR0 18!F:55!F G:U fS_1 [tSW][-] 9.22 32.36; 92.2 59.84 -152.46 1.81 42.94
tRNA 2NR0 19!F:56!F G:C WC [cWW][XIX] 10.89 60.11; 54.5 5.62 -16.28 1.81 43.04
tRNA 2NR0 20A!F:47!F A:U rH_1_Mo [tWH][XXIV] 10.68 6.21; 43.75 37.54 -46.03 0.59 43.02
tRNA 2NR0 26!F:44!F G:U Wb [cWW][XXVIII] 10.95 39.78; 50.38 10.6 3.61 0.55 6.85
tRNA 2NR0 27!F:43!F C:G WC [cWW][XIX] 10.22 54.76; 57.1 2.34 -2.39 0.03 28.06
tRNA 2NR0 28!F:42!F U:A WC [cWW][XX] 11.08 49.27; 55.27 6.0 6.47 1.04 16.97
tRNA 2NR0 29!F:41!F A:U WC [cWW][XX] 10.82 46.78; 54.83 8.05 -12.02 0.05 15.42
tRNA 2NR0 30!F:40!F C:G WC [cWW][XIX] 10.56 58.38; 56.09 2.29 -2.49 0.73 8.83
tRNA 2NR0 33!F:38!F U:U Wb [cWW][XVI] 9.22 25.91; 60.9 35.0 -59.47 1.92 34.57
tRNA 2NR0 45A!F:46L!F G:C WC [cWW][XIX] 10.51 50.64; 52.47 1.83 15.26 0.47 10.08
tRNA 2NR0 49!F:65!F A:U WC [cWW][XX] 10.29 49.58; 63.1 13.52 -7.55 0.84 2.86
tRNA 2NR0 50!F:64!F C:G WC [cWW][XIX] 10.94 50.87; 56.32 5.45 -12.19 0.4 10.93
tRNA 2NR0 51!F:63!F G:C WC [cWW][XIX] 10.86 49.16; 57.29 8.13 4.43 0.1 3.89
tRNA 2NR0 52!F:62!F G:C WC [cWW][XIX] 11.07 51.19; 47.12 4.07 5.06 0.21 26.28
tRNA 2NR0 53!F:61!F G:C Wb* [---][-] 11.07 63.02; 46.4 16.62 10.72 0.61 27.59
tRNA 2NR0 5!G:68!G A:U WC [cWW][XX] 10.1 56.18; 60.24 4.06 11.34 0.97 7.82
tRNA 2NR0 6!G:67!G G:C WC [cWW][XIX] 10.93 57.21; 52.46 4.75 0.3 0.42 6.4
tRNA 2NR0 7!G:66!G G:C WC [cWW][XIX] 10.91 51.83; 48.9 2.93 -21.12 0.15 28.63
tRNA 2NR0 8!G:20A!G U:A fS(sb:O2*-N1) [tSW][-] 8.61 99.54; 55.23 44.31 153.71 0.71 31.13
tRNA 2NR0 8!G:14!G U:A rH_1 [tWH][XXIV] 10.35 39.95; 19.77 20.18 165.37 0.73 19.75
tRNA 2NR0 10!G:25!G G:C WC [cWW][XIX] 10.75 52.16; 53.26 1.11 2.62 0.8 1.89
tRNA 2NR0 11!G:24!G U:A WC [cWW][XX] 10.17 58.23; 58.31 0.08 -6.73 0.25 18.46
tRNA 2NR0 12!G:23!G G:C WC [cWW][XIX] 10.65 50.66; 46.36 4.29 -20.75 0.44 31.05
tRNA 2NR0 13!G:22!G G:A S [tSH][XI] 9.55 106.42; 7.12 99.3 -43.15 0.37 35.38
tRNA 2NR0 14!G:20A!G A:A pfS [cSW][-] 9.54 32.5; 118.74 86.24 -15.34 0.35 16.36
tRNA 2NR0 15!G:48!G A:U rWb*_e [---][-] 11.62 15.85; 48.25 32.4 112.81 0.61 29.79
tRNA 2NR0 18!G:55!G G:U fS_1 [tSW][-] 8.97 19.7; 101.55 81.86 -172.52 0.45 19.58
tRNA 2NR0 19!G:56!G G:C WC [cWW][XIX] 10.69 60.46; 43.55 16.9 -26.56 0.55 27.06
tRNA 2NR0 26!G:44!G G:U Wb [cWW][XXVIII] 10.73 40.62; 68.0 27.38 -0.25 0.25 10.86
tRNA 2NR0 27!G:43!G C:G WC [cWW][XIX] 10.44 63.26; 56.48 6.78 -1.75 0.18 8.8
tRNA 2NR0 28!G:42!G U:A WC [cWW][XX] 10.76 53.5; 62.89 9.39 6.19 0.43 5.58
tRNA 2NR0 29!G:41!G A:U WC [cWW][XX] 10.87 56.97; 46.75 10.22 -3.3 0.36 10.78
tRNA 2NR0 30!G:40!G C:G WC [cWW][XIX] 10.65 55.51; 49.06 6.46 -1.29 0.14 23.17
tRNA 2NR0 31!G:39!G C:G WC [cWW][XIX] 10.58 53.99; 51.49 2.5 -13.69 0.76 25.88
tRNA 2NR0 32!G:38!G U:U Wb_mo [cWW][XVI] 9.8 40.15; 61.34 21.18 7.28 0.53 7.01
tRNA 2NR0 45A!G:46L!G G:C WC [cWW][XIX] 10.57 56.12; 49.39 6.73 -15.83 1.14 6.36
tRNA 2NR0 45B!G:46K!G C:G WC [cWW][XIX] 11.43 46.94; 46.62 0.32 3.4 0.41 18.37
tRNA 2NR0 49!G:65!G A:U WC [cWW][XX] 10.84 51.58; 50.38 1.2 -2.25 0.16 5.89
tRNA 2NR0 50!G:64!G C:G WC [cWW][XIX] 10.51 59.2; 53.33 5.87 3.1 0.87 21.84
tRNA 2NR0 51!G:63!G G:C WC [cWW][XIX] 10.77 55.59; 55.47 0.12 -3.95 0.43 11.54
tRNA 2NR0 52!G:62!G G:C WC [cWW][XIX] 10.51 50.87; 57.5 6.63 -14.53 0.91 28.17
tRNA 2NR0 53!G:61!G G:C WC [cWW][XIX] 10.82 55.28; 50.08 5.2 -0.78 0.84 21.09
tRNA 2NR0 54!G:58!G U:A rH_1 [tWH][XXIV] 10.18 26.39; 12.21 14.17 -156.13 0.22 12.57
tRNA 2NR0 4H:69!H G:C WC [cWW][XIX] 10.86 52.87; 50.15 2.72 18.79 1.59 7.02
tRNA 2NR0 5H:68!H A:U WC [cWW][XX] 10.61 54.66; 51.43 3.23 4.75 0.12 5.48
tRNA 2NR0 6H:67!H G:C WC [cWW][XIX] 10.62 56.45; 51.24 5.21 5.63 0.19 7.27
tRNA 2NR0 7H:66!H G:C WC [cWW][XIX] 10.95 46.1; 56.92 10.81 -26.43 0.53 29.47
tRNA 2NR0 8H:21!H U:G rS(sb:O2*-N2) [---][-] 7.21 100.14; 95.94 4.2 -173.08 2.01 54.05
tRNA 2NR0 8H:14!H U:A rH_1 [tWH][XXIV] 9.34 47.92; 18.82 29.09 -169.7 2.0 71.67
tRNA 2NR0 10!H:25!H G:C WC [cWW][XIX] 10.68 52.6; 56.86 4.26 5.25 0.28 3.12
tRNA 2NR0 11!H:24!H U:A WC [cWW][XX] 10.22 51.3; 62.59 11.28 1.22 0.24 6.57
tRNA 2NR0 12!H:23!H G:C WC [cWW][XIX] 11.03 44.41; 51.32 6.92 -4.77 0.08 27.83
tRNA 2NR0 13!H:22!H G:A S [tSH][XI] 9.73 97.65; 3.95 93.7 64.85 0.58 19.37
tRNA 2NR0 14!H:20A!H A:A pfS [cSW][-] 9.19 34.94; 117.21 82.27 -19.46 0.14 28.46
tRNA 2NR0 15!H:48!H A:U rWC [tWW][XXI] 11.24 10.76; 46.76 36.0 155.22 0.63 20.31
tRNA 2NR0 18!H:55!H G:U fS_2 [---][-] 8.8 35.71; 109.16 73.46 -165.62 1.29 39.72
tRNA 2NR0 19!H:56!H G:C WC [cWW][XIX] 10.87 56.21; 47.71 8.5 -13.4 0.83 40.64
tRNA 2NR0 21!H:47!H G:U Wb_mo [cWW][XXVIII] 11.47 33.74; 45.87 12.13 -27.29 2.5 51.6
tRNA 2NR0 28!H:42!H U:A WC [cWW][XX] 10.36 55.15; 54.2 0.95 -0.19 0.21 8.55
tRNA 2NR0 30!H:40!H C:G WC [cWW][XIX] 10.91 59.59; 54.64 4.95 -6.86 0.43 13.12
tRNA 2NR0 31!H:39!H C:G WC [cWW][XIX] 10.49 49.85; 58.74 8.89 16.34 1.2 18.46
tRNA 2NR0 45A!H:46L!H G:C WC [cWW][XIX] 10.18 54.41; 55.29 0.88 -6.3 0.66 29.65
tRNA 2NR0 45B!H:46K!H C:G WC [cWW][XIX] 10.37 55.13; 49.2 5.93 -0.17 0.37 5.27
tRNA 2NR0 45C!H:46J!H C:G WC [cWW][XIX] 10.6 46.16; 56.42 10.27 -8.77 0.4 19.12
tRNA 2NR0 49!H:65!H A:U WC [cWW][XX] 10.41 44.67; 55.27 10.6 -3.67 0.51 14.08
tRNA 2NR0 50!H:64!H C:G WC [cWW][XIX] 10.25 56.69; 46.61 10.08 -9.02 0.61 18.9
tRNA 2NR0 51!H:63!H G:C WC [cWW][XIX] 10.87 53.23; 56.04 2.81 -0.14 0.14 6.65
tRNA 2NR0 52!H:62!H G:C WC [cWW][XIX] 10.66 57.14; 57.47 0.32 2.76 0.65 13.03
tRNA 2NR0 53!H:61!H G:C WC [cWW][XIX] 10.62 53.78; 59.18 5.4 -0.84 0.53 31.71