Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2O3V
BPC Identified: 18
Ambiguities: 0
rRNA |
2O3V |
3!A:46!B |
G:C |
WC [cWW][XIX] |
10.54 |
57.9; 54.92 |
2.98 |
-14.88 |
0.22 |
24.03 |
rRNA |
2O3V |
4!A:45!B |
C:G |
WC [cWW][XIX] |
10.3 |
59.82; 58.36 |
1.45 |
-9.84 |
0.11 |
25.71 |
rRNA |
2O3V |
5!A:44!B |
G:C |
WC [cWW][XIX] |
10.25 |
58.92; 61.54 |
2.62 |
-3.05 |
0.65 |
12.08 |
rRNA |
2O3V |
6!A:43!B |
U:U |
Wb [cWW][XVI] |
8.89 |
71.23; 45.0 |
26.23 |
-9.95 |
0.1 |
9.78 |
rRNA |
2O3V |
7!A:42!B |
C:G |
WC [cWW][XIX] |
10.54 |
55.48; 53.96 |
1.52 |
0.49 |
0.08 |
8.32 |
rRNA |
2O3V |
9!A:39!B |
C:A |
Wb* [cWW][-] |
10.6 |
49.5; 76.82 |
27.32 |
-3.02 |
0.14 |
7.07 |
rRNA |
2O3V |
10!A:38!B |
U:A |
WC [cWW][XX] |
10.26 |
58.07; 54.86 |
3.21 |
-11.95 |
0.71 |
7.15 |
rRNA |
2O3V |
11!A:37!B |
C:G |
WC [cWW][XIX] |
10.49 |
53.84; 52.81 |
1.03 |
-8.72 |
0.12 |
9.04 |
rRNA |
2O3V |
12!A:36!B |
C:G |
WC [cWW][XIX] |
10.68 |
57.34; 55.27 |
2.07 |
0.64 |
0.06 |
7.11 |
rRNA |
2O3V |
13!A:35!B |
G:C |
WC [cWW][XIX] |
10.5 |
54.54; 54.85 |
0.31 |
-4.19 |
0.21 |
11.04 |
rRNA |
2O3V |
14!A:34!B |
G:C |
WC [cWW][XIX] |
10.52 |
52.74; 57.39 |
4.65 |
0.1 |
0.2 |
8.41 |
rRNA |
2O3V |
15!A:33!B |
A:U |
WC [cWW][XX] |
10.5 |
52.21; 55.83 |
3.61 |
-5.44 |
0.04 |
10.46 |
rRNA |
2O3V |
17!A:32!B |
A:C |
pfS* [cWS][-] |
7.74 |
127.17; 42.18 |
84.99 |
-15.35 |
0.14 |
17.07 |
rRNA |
2O3V |
19!A:30!B |
G:C |
WC [cWW][XIX] |
10.8 |
51.93; 51.72 |
0.21 |
-7.83 |
0.08 |
8.24 |
rRNA |
2O3V |
20!A:29!B |
U:U |
Wb [cWW][XVI] |
8.94 |
43.57; 69.18 |
25.61 |
-7.36 |
0.41 |
22.41 |
rRNA |
2O3V |
21!A:28!B |
C:G |
WC [cWW][XIX] |
10.58 |
53.49; 53.85 |
0.36 |
-6.06 |
0.05 |
15.63 |
rRNA |
2O3V |
22!A:27!B |
G:C |
WC [cWW][XIX] |
10.56 |
56.21; 57.25 |
1.03 |
-6.76 |
0.12 |
8.65 |
rRNA |
2O3V |
23!A:26!B |
C:G |
WC [cWW][XIX] |
10.47 |
51.32; 58.12 |
6.8 |
-4.04 |
0.05 |
7.99 |