Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2O3X
BPC Identified: 17
Ambiguities: 0
| rRNA |
2O3X |
3!A:46!B |
G:C |
WC [cWW][XIX] |
10.52 |
51.85; 54.6 |
2.75 |
-0.48 |
0.42 |
10.13 |
| rRNA |
2O3X |
4!A:45!B |
C:G |
WC [cWW][XIX] |
10.75 |
52.88; 56.73 |
3.85 |
-5.04 |
0.18 |
6.7 |
| rRNA |
2O3X |
5!A:44!B |
G:C |
WC [cWW][XIX] |
10.41 |
57.33; 56.41 |
0.92 |
-4.28 |
0.16 |
3.6 |
| rRNA |
2O3X |
7!A:42!B |
C:G |
WC [cWW][XIX] |
10.68 |
55.43; 53.32 |
2.11 |
-1.23 |
0.23 |
9.65 |
| rRNA |
2O3X |
9!A:39!B |
C:G |
WC [cWW][XIX] |
10.64 |
58.51; 54.64 |
3.87 |
-11.72 |
0.23 |
23.63 |
| rRNA |
2O3X |
10!A:38!B |
A:U |
WC [cWW][XX] |
10.33 |
57.31; 55.17 |
2.14 |
-16.2 |
0.12 |
17.45 |
| rRNA |
2O3X |
11!A:37!B |
C:G |
WC [cWW][XIX] |
10.38 |
58.21; 56.4 |
1.81 |
-6.95 |
0.1 |
19.78 |
| rRNA |
2O3X |
12!A:36!B |
C:G |
WC [cWW][XIX] |
10.78 |
52.04; 52.66 |
0.62 |
-8.82 |
0.3 |
9.36 |
| rRNA |
2O3X |
13!A:35!B |
G:C |
WC [cWW][XIX] |
10.59 |
55.12; 55.12 |
0.01 |
-17.77 |
0.02 |
23.78 |
| rRNA |
2O3X |
14!A:34!B |
G:C |
WC [cWW][XIX] |
10.74 |
53.99; 51.55 |
2.44 |
-12.19 |
0.14 |
14.47 |
| rRNA |
2O3X |
15!A:33!B |
U:A |
WC [cWW][XX] |
10.01 |
60.29; 57.26 |
3.03 |
-10.95 |
0.1 |
13.97 |
| rRNA |
2O3X |
16!A:32!B |
G:C |
WC [cWW][XIX] |
10.64 |
57.8; 51.78 |
6.03 |
-9.21 |
0.18 |
15.04 |
| rRNA |
2O3X |
19!A:30!B |
G:C |
WC [cWW][XIX] |
10.93 |
53.16; 50.76 |
2.39 |
-1.43 |
0.12 |
5.05 |
| rRNA |
2O3X |
20!A:29!B |
U:U |
Wb [cWW][XVI] |
8.31 |
52.34; 71.27 |
18.93 |
-15.04 |
0.0 |
15.64 |
| rRNA |
2O3X |
21!A:28!B |
C:G |
WC [cWW][XIX] |
10.45 |
58.23; 55.65 |
2.58 |
-14.25 |
0.13 |
18.43 |
| rRNA |
2O3X |
22!A:27!B |
G:C |
WC [cWW][XIX] |
10.29 |
57.83; 58.17 |
0.33 |
-4.95 |
0.47 |
16.71 |
| rRNA |
2O3X |
23!A:26!B |
C:G |
WC [cWW][XIX] |
10.53 |
56.01; 54.01 |
1.99 |
-2.73 |
0.02 |
4.81 |