Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2O3Y
BPC Identified: 18
Ambiguities: 0
| rRNA |
2O3Y |
3!A:46!B |
G:C |
WC |
10.77 |
53.98; 55.37 |
1.39 |
4.78 |
0.24 |
10.88 |
| rRNA |
2O3Y |
4!A:45!B |
C:G |
WC |
10.77 |
53.93; 54.51 |
0.58 |
-7.27 |
0.1 |
15.74 |
| rRNA |
2O3Y |
5!A:44!B |
G:C |
WC |
10.52 |
55.71; 56.5 |
0.8 |
-1.85 |
0.59 |
3.48 |
| rRNA |
2O3Y |
6!A:43!B |
U:U |
Wb |
9.07 |
70.63; 42.8 |
27.83 |
-13.48 |
0.45 |
19.64 |
| rRNA |
2O3Y |
7!A:42!B |
C:G |
WC |
10.65 |
56.15; 56.16 |
0.01 |
4.47 |
0.4 |
9.99 |
| rRNA |
2O3Y |
9!A:39!B |
C:A |
Wb* |
10.87 |
50.27; 66.6 |
16.34 |
-6.01 |
0.7 |
8.15 |
| rRNA |
2O3Y |
10!A:38!B |
U:A |
WC |
10.51 |
58.05; 55.85 |
2.2 |
-2.93 |
0.81 |
15.48 |
| rRNA |
2O3Y |
11!A:37!B |
C:G |
WC |
10.69 |
56.24; 54.83 |
1.41 |
-4.23 |
0.12 |
12.6 |
| rRNA |
2O3Y |
12!A:36!B |
C:G |
WC |
10.83 |
52.29; 52.67 |
0.38 |
0.25 |
0.22 |
7.93 |
| rRNA |
2O3Y |
13!A:35!B |
G:C |
WC |
10.77 |
53.46; 53.43 |
0.03 |
-3.11 |
0.68 |
5.84 |
| rRNA |
2O3Y |
14!A:34!B |
G:C |
WC |
10.67 |
53.39; 55.82 |
2.43 |
-7.63 |
0.52 |
15.78 |
| rRNA |
2O3Y |
15!A:33!B |
A:U |
WC |
10.77 |
52.07; 52.03 |
0.04 |
-1.09 |
0.22 |
6.98 |
| rRNA |
2O3Y |
17!A:32!B |
A:C |
pfS* |
8.13 |
124.49; 39.75 |
84.75 |
-12.7 |
0.76 |
13.84 |
| rRNA |
2O3Y |
19!A:30!B |
G:C |
WC |
10.65 |
56.46; 53.89 |
2.56 |
-9.84 |
0.81 |
10.4 |
| rRNA |
2O3Y |
20!A:29!B |
U:U |
Wb |
9.24 |
41.57; 67.23 |
25.65 |
-6.7 |
0.52 |
13.87 |
| rRNA |
2O3Y |
21!A:28!B |
C:G |
WC |
10.58 |
57.12; 55.2 |
1.91 |
-7.4 |
0.35 |
11.97 |
| rRNA |
2O3Y |
22!A:27!B |
G:C |
WC |
10.64 |
56.62; 53.94 |
2.68 |
-1.01 |
0.88 |
16.36 |
| rRNA |
2O3Y |
23!A:26!B |
C:G |
WC |
10.97 |
51.28; 50.92 |
0.36 |
-4.73 |
0.23 |
12.48 |