Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2OE8
BPC Identified: 15
Ambiguities: 0
| rRNA |
2OE8 |
2!A:99!B |
G:C |
WC [cWW][XIX] |
10.79 |
54.69; 52.16 |
2.53 |
-4.58 |
0.08 |
12.5 |
| rRNA |
2OE8 |
3!A:98!B |
G:C |
WC [cWW][XIX] |
10.42 |
54.61; 54.71 |
0.1 |
-6.75 |
0.0 |
15.39 |
| rRNA |
2OE8 |
1404!A:1497!B |
C:G |
WC [cWW][XIX] |
10.72 |
56.49; 53.89 |
2.6 |
-4.97 |
0.06 |
10.99 |
| rRNA |
2OE8 |
1405!A:1496!B |
G:C |
WC [cWW][XIX] |
10.57 |
55.85; 56.23 |
0.39 |
-6.69 |
0.07 |
14.86 |
| rRNA |
2OE8 |
1406!A:1495!B |
U:U |
Wb [cWW][XVI] |
9.27 |
40.63; 68.37 |
27.74 |
-12.59 |
0.11 |
17.84 |
| rRNA |
2OE8 |
1407!A:1494!B |
C:G |
WC [cWW][XIX] |
10.54 |
55.19; 55.35 |
0.16 |
-7.18 |
0.1 |
15.04 |
| rRNA |
2OE8 |
1408!A:1493!B |
G:A |
S [tSH][XI] |
10.55 |
78.06; 23.26 |
54.79 |
147.92 |
1.31 |
29.03 |
| rRNA |
2OE8 |
1409!A:1492!B |
C:A |
pfS* [cWS][-] |
7.67 |
40.97; 130.39 |
89.42 |
-23.23 |
0.27 |
23.68 |
| rRNA |
2OE8 |
1410!A:1490!B |
U:A |
WC [cWW][XX] |
10.59 |
53.75; 54.09 |
0.34 |
-10.33 |
0.08 |
14.04 |
| rRNA |
2OE8 |
1411!A:1489!B |
A:U |
WC [cWW][XX] |
10.4 |
56.33; 54.85 |
1.49 |
-14.52 |
0.12 |
15.5 |
| rRNA |
2OE8 |
1412!A:1488!B |
G:C |
WC [cWW][XIX] |
10.71 |
51.69; 53.3 |
1.61 |
-15.72 |
0.12 |
17.71 |
| rRNA |
2OE8 |
1413!A:1487!B |
U:A |
WC [cWW][XX] |
10.25 |
58.49; 58.5 |
0.01 |
-10.92 |
0.09 |
12.18 |
| rRNA |
2OE8 |
14!A:86!B |
A:U |
WC [cWW][XX] |
10.2 |
58.49; 59.06 |
0.57 |
-11.88 |
0.08 |
16.78 |
| rRNA |
2OE8 |
15!A:85!B |
C:G |
WC [cWW][XIX] |
10.61 |
56.37; 51.85 |
4.52 |
-11.18 |
0.22 |
15.66 |
| rRNA |
2OE8 |
16!A:84!B |
C:G |
WC [cWW][XIX] |
10.74 |
55.97; 51.13 |
4.84 |
-5.14 |
0.02 |
7.75 |