Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2OIU BPC Identified: 72 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 2OIU 1!P:51!P G:A S [tSH][XI] 10.02 99.75; 14.36 85.39 -12.24 0.84 19.54
RNA_aptamer 2OIU 2!P:50!P G:U Wb [cWW][XXVIII] 10.39 42.76; 68.39 25.63 -2.51 0.02 9.3
RNA_aptamer 2OIU 3!P:49!P A:U WC [cWW][XX] 10.46 58.68; 56.37 2.31 1.85 0.01 2.39
RNA_aptamer 2OIU 4!P:63!Q C:A rpS(bs:O2-O2*) [cSS][-] 5.74 99.07; 160.71 61.63 -63.76 0.08 23.72
RNA_aptamer 2OIU 4!P:48!P C:G WC [cWW][XIX] 10.56 53.2; 58.35 5.15 1.29 0.36 16.2
RNA_aptamer 2OIU 5!P:62!Q C:A rpS(sb:O2*-N3) [cSS][-] 5.44 146.26; 98.74 47.52 -61.96 0.21 33.09
RNA_aptamer 2OIU 5!P:47!P C:G WC [cWW][XIX] 10.4 58.79; 56.44 2.35 -4.96 0.18 19.76
RNA_aptamer 2OIU 6!P:46!P U:A WC [cWW][XX] 10.31 57.54; 59.31 1.78 -1.44 0.19 8.6
RNA_aptamer 2OIU 7!P:45!P C:G WC [cWW][XIX] 10.57 56.26; 52.45 3.82 8.39 0.1 9.96
RNA_aptamer 2OIU 8!P:17!P G:C WC [cWW][XIX] 10.56 53.38; 58.23 4.84 0.82 0.18 11.5
RNA_aptamer 2OIU 9!P:16!P G:C WC [cWW][XIX] 10.74 55.02; 52.83 2.18 -3.46 0.39 12.18
RNA_aptamer 2OIU 10!P:15!P C:G WC [cWW][XIX] 10.4 57.43; 53.74 3.69 0.82 0.08 4.91
RNA_aptamer 2OIU 11!P:14!P G:A S [tSH][XI] 9.34 97.16; 9.43 87.73 -84.34 0.13 18.84
RNA_aptamer 2OIU 11!P:13!P G:A S(sb:O2*-N7) [---][-] 7.55 84.14; 37.49 46.65 -172.49 2.55 27.76
RNA_aptamer 2OIU 18!P:42!P G:C WC [cWW][XIX] 10.43 55.89; 56.71 0.82 -2.85 0.11 15.53
RNA_aptamer 2OIU 20!P:41!P U:A WC [cWW][XX] 10.48 62.59; 55.37 7.23 -8.03 0.15 12.05
RNA_aptamer 2OIU 21!P:40!P C:G WC [cWW][XIX] 10.55 58.55; 54.78 3.77 -7.68 0.11 12.99
RNA_aptamer 2OIU 22!P:39!P G:A S [tSH][XI] 9.41 98.68; 7.19 91.5 -33.67 0.57 12.55
RNA_aptamer 2OIU 23!P:37!P A:U S [tSH][-] 10.2 8.57; 66.34 57.77 162.37 0.49 8.76
RNA_aptamer 2OIU 26!P:35!P A:U WC [cWW][XX] 10.1 61.42; 68.86 7.44 -10.73 0.11 13.73
RNA_aptamer 2OIU 27!P:34!P G:C WC [cWW][XIX] 10.35 58.46; 58.32 0.14 -5.12 0.24 5.58
RNA_aptamer 2OIU 28!P:33!P C:G WC [cWW][XIX] 10.78 52.81; 55.43 2.63 5.08 0.22 3.03
RNA_aptamer 2OIU 29!P:32!P G:A S [tSH][XI] 8.78 96.1; 14.95 81.15 -121.63 0.45 14.48
RNA_aptamer 2OIU 29!P:31!P G:A S(sb:O2*-N7) [---][-] 7.79 85.58; 28.91 56.67 178.09 2.33 22.63
RNA_aptamer 2OIU 47!P:61!Q G:A fS [tSW][X] 10.65 110.77; 35.28 75.5 98.68 0.49 51.17
RNA_aptamer 2OIU 48!P:63!Q G:A rS [tSS][-] 7.75 90.46; 69.8 20.65 164.26 1.08 32.44
RNA_aptamer 2OIU 49!P:64!Q U:G rS(ss:O2*-O2*)_2 [---][-] 6.67 148.42; 150.85 2.43 -144.47 1.11 28.12
RNA_aptamer 2OIU 52!P:71!P G:U Wb [cWW][XXVIII] 10.3 43.06; 69.29 26.23 -13.79 0.13 18.2
RNA_aptamer 2OIU 53!P:70!P G:C WC [cWW][XIX] 10.62 53.46; 55.63 2.17 -11.72 0.34 17.85
RNA_aptamer 2OIU 54!P:69!P U:A WC [cWW][XX] 10.41 57.64; 55.99 1.65 -8.33 0.13 10.18
RNA_aptamer 2OIU 55!P:68!P G:C WC [cWW][XIX] 10.51 56.51; 57.21 0.7 -12.55 0.06 17.71
RNA_aptamer 2OIU 56!P:67!P C:G WC [cWW][XIX] 10.69 56.87; 52.67 4.2 -7.45 0.3 13.94
RNA_aptamer 2OIU 57!P:66!P U:A WC [cWW][XX] 10.23 59.11; 55.81 3.3 -4.77 0.38 11.8
RNA_aptamer 2OIU 58!P:65!P C:G WC [cWW][XIX] 10.48 57.79; 54.21 3.58 -3.69 0.07 10.73
RNA_aptamer 2OIU 59!P:64!P C:G WC [cWW][XIX] 10.73 54.65; 51.26 3.39 0.94 0.2 6.28
RNA_aptamer 2OIU 60!P:63!P G:A S_mo [tSH][XI] 9.97 84.68; 21.65 63.04 -142.82 0.08 17.61
RNA_aptamer 2OIU 60!P:62!P G:A S(sb:O2*-N7) [---][-] 7.63 83.8; 37.69 46.11 -164.82 2.68 33.23
RNA_aptamer 2OIU 62!P:5!Q A:C rpS(sb:O2*-N3) [cSS][-] 5.45 98.73; 152.84 54.11 -57.74 1.33 40.05
RNA_aptamer 2OIU 63!P:48!Q A:G rS [tSS][-] 8.14 62.28; 88.58 26.3 157.67 0.68 20.99
RNA_aptamer 2OIU 63!P:4!Q A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.85 148.33; 108.15 40.18 -49.37 1.76 6.11
RNA_aptamer 2OIU 64!P:49!Q G:U rS(ss:O2*-O2*)_2 [---][-] 5.79 163.6; 158.76 4.85 -120.96 0.2 24.86
RNA_aptamer 2OIU 1!Q:51!Q G:A S [tSH][XI] 9.77 94.08; 9.85 84.23 -34.19 0.3 12.83
RNA_aptamer 2OIU 2!Q:50!Q G:U Wb [cWW][XXVIII] 10.48 38.9; 67.52 28.62 -8.18 0.18 13.63
RNA_aptamer 2OIU 3!Q:49!Q A:U WC [cWW][XX] 10.38 55.62; 55.34 0.28 -11.72 0.32 17.74
RNA_aptamer 2OIU 4!Q:48!Q C:G WC [cWW][XIX] 10.39 57.39; 54.43 2.96 -9.92 0.14 20.38
RNA_aptamer 2OIU 5!Q:47!Q C:G WC [cWW][XIX] 10.65 55.65; 54.63 1.03 -4.63 0.3 11.64
RNA_aptamer 2OIU 6!Q:46!Q U:A WC [cWW][XX] 10.29 55.55; 59.64 4.09 -7.15 0.06 9.26
RNA_aptamer 2OIU 7!Q:45!Q C:G WC [cWW][XIX] 10.7 54.3; 56.59 2.29 -5.15 0.62 16.18
RNA_aptamer 2OIU 8!Q:17!Q G:C WC [cWW][XIX] 10.7 49.0; 50.0 1.01 10.56 0.34 15.68
RNA_aptamer 2OIU 9!Q:16!Q G:C WC [cWW][XIX] 10.81 52.84; 49.7 3.15 -2.66 0.03 4.02
RNA_aptamer 2OIU 10!Q:15!Q C:G WC [cWW][XIX] 10.57 53.34; 53.28 0.06 2.05 0.02 4.26
RNA_aptamer 2OIU 11!Q:14!Q G:A S [tSH][XI] 9.04 97.74; 9.55 88.2 -76.33 0.08 15.18
RNA_aptamer 2OIU 11!Q:13!Q G:A S(sb:O2*-N7) [---][-] 7.63 89.92; 30.39 59.52 -170.41 2.07 24.57
RNA_aptamer 2OIU 18!Q:42!Q G:C WC [cWW][XIX] 10.37 55.77; 58.32 2.55 -8.9 0.78 20.68
RNA_aptamer 2OIU 20!Q:41!Q U:A WC [cWW][XX] 10.4 54.99; 52.29 2.71 -7.44 0.42 15.96
RNA_aptamer 2OIU 21!Q:40!Q C:G WC [cWW][XIX] 10.62 53.15; 48.44 4.71 -7.08 0.16 12.8
RNA_aptamer 2OIU 22!Q:39!Q G:A S [tSH][XI] 9.62 95.09; 6.3 88.79 -41.88 0.02 7.87
RNA_aptamer 2OIU 23!Q:37!Q A:U rH_1 [tWH][XXIV] 9.71 19.37; 31.72 12.35 173.93 0.11 4.12
RNA_aptamer 2OIU 26!Q:35!Q A:U WC [cWW][XX] 10.25 55.37; 64.14 8.77 -11.3 0.48 21.52
RNA_aptamer 2OIU 27!Q:34!Q G:C WC [cWW][XIX] 10.85 50.75; 57.43 6.68 -13.52 0.77 31.97
RNA_aptamer 2OIU 28!Q:33!Q C:G WC [cWW][XIX] 10.51 56.13; 55.46 0.68 14.88 0.11 22.93
RNA_aptamer 2OIU 38!Q:51!Q U:A rWC [tWW][XXI] 11.14 38.16; 33.25 4.91 -176.34 0.15 9.05
RNA_aptamer 2OIU 52!Q:71!Q G:U Wb [cWW][XXVIII] 10.39 40.77; 67.86 27.09 -2.07 0.08 7.33
RNA_aptamer 2OIU 53!Q:70!Q G:C WC [cWW][XIX] 10.45 53.58; 53.51 0.06 1.11 0.02 9.24
RNA_aptamer 2OIU 54!Q:69!Q U:A WC [cWW][XX] 10.44 54.2; 57.34 3.14 -1.67 0.07 8.99
RNA_aptamer 2OIU 55!Q:68!Q G:C WC [cWW][XIX] 10.7 53.86; 54.01 0.15 -8.28 0.39 14.39
RNA_aptamer 2OIU 56!Q:67!Q C:G WC [cWW][XIX] 10.63 57.66; 50.72 6.94 -10.14 0.06 13.79
RNA_aptamer 2OIU 57!Q:66!Q U:A WC [cWW][XX] 10.13 61.83; 53.39 8.44 -12.36 0.22 16.4
RNA_aptamer 2OIU 58!Q:65!Q C:G WC [cWW][XIX] 10.78 53.51; 53.59 0.08 -7.9 0.06 15.39
RNA_aptamer 2OIU 59!Q:64!Q C:G WC [cWW][XIX] 10.74 55.35; 50.01 5.34 3.41 0.17 5.36
RNA_aptamer 2OIU 60!Q:63!Q G:A S [tSH][XI] 9.32 96.62; 6.76 89.86 -114.39 0.23 7.22
RNA_aptamer 2OIU 60!Q:62!Q G:A S(sb:O2*-N7) [---][-] 7.86 88.5; 32.31 56.19 -178.48 2.41 21.74