Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2OIY
BPC Identified: 20
Ambiguities: 0
vRNA |
2OIY |
1!A:23!B |
C:G |
WC [cWW][XIX] |
10.57 |
53.63; 56.39 |
2.76 |
-13.01 |
0.02 |
18.64 |
vRNA |
2OIY |
2!A:22!B |
U:A |
WC [cWW][XX] |
10.42 |
57.17; 55.43 |
1.74 |
-14.42 |
0.13 |
18.25 |
vRNA |
2OIY |
3!A:21!B |
U:A |
WC [cWW][XX] |
10.54 |
54.72; 55.94 |
1.21 |
-7.91 |
0.08 |
11.89 |
vRNA |
2OIY |
4!A:20!B |
G:C |
WC [cWW][XIX] |
10.62 |
55.1; 54.69 |
0.41 |
-8.96 |
0.18 |
11.32 |
vRNA |
2OIY |
5!A:19!B |
C:G |
WC [cWW][XIX] |
10.77 |
53.97; 52.67 |
1.29 |
-11.84 |
0.07 |
17.39 |
vRNA |
2OIY |
6!A:18!B |
U:G |
Wb [cWW][XXVIII] |
10.52 |
66.04; 41.54 |
24.5 |
-8.46 |
0.28 |
14.46 |
vRNA |
2OIY |
7!A:17!B |
G:C |
WC [cWW][XIX] |
10.42 |
56.33; 56.1 |
0.22 |
10.29 |
0.28 |
14.08 |
vRNA |
2OIY |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.65 |
53.41; 54.96 |
1.56 |
-14.22 |
0.27 |
18.83 |
vRNA |
2OIY |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.59 |
56.86; 55.26 |
1.6 |
-8.58 |
0.18 |
14.76 |
vRNA |
2OIY |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.65 |
53.52; 54.83 |
1.31 |
2.08 |
0.02 |
5.18 |
vRNA |
2OIY |
13!A:12!B |
C:G |
WC [cWW][XIX] |
10.62 |
56.35; 55.72 |
0.63 |
-5.95 |
0.16 |
12.93 |
vRNA |
2OIY |
14!A:11!B |
G:C |
WC [cWW][XIX] |
10.63 |
55.59; 54.58 |
1.01 |
-5.13 |
0.23 |
10.72 |
vRNA |
2OIY |
15!A:10!B |
C:G |
WC [cWW][XIX] |
10.39 |
59.11; 52.12 |
6.99 |
-9.24 |
0.17 |
12.24 |
vRNA |
2OIY |
17!A:7!B |
C:G |
WC [cWW][XIX] |
10.6 |
54.1; 55.5 |
1.4 |
1.51 |
0.45 |
14.29 |
vRNA |
2OIY |
18!A:6!B |
G:U |
Wb [cWW][XXVIII] |
10.28 |
43.98; 69.96 |
25.98 |
-11.01 |
0.01 |
12.96 |
vRNA |
2OIY |
19!A:5!B |
G:C |
WC [cWW][XIX] |
10.5 |
54.86; 56.67 |
1.81 |
-13.43 |
0.01 |
18.2 |
vRNA |
2OIY |
20!A:4!B |
C:G |
WC [cWW][XIX] |
10.59 |
57.22; 54.18 |
3.03 |
-11.49 |
0.15 |
15.98 |
vRNA |
2OIY |
21!A:3!B |
A:U |
WC [cWW][XX] |
10.24 |
57.91; 55.82 |
2.09 |
-14.44 |
0.12 |
17.61 |
vRNA |
2OIY |
22!A:2!B |
A:U |
WC [cWW][XX] |
10.38 |
56.49; 52.21 |
4.28 |
-12.49 |
0.07 |
14.65 |
vRNA |
2OIY |
23!A:1!B |
G:C |
WC [cWW][XIX] |
10.86 |
55.9; 49.0 |
6.9 |
-16.53 |
0.13 |
22.68 |