Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2OZB
BPC Identified: 26
Ambiguities: 0
| snoRNA |
2OZB |
20!C:52!C |
A:U |
WC [cWW][XX] |
10.27 |
57.96; 59.48 |
1.53 |
-10.57 |
0.12 |
15.56 |
| snoRNA |
2OZB |
21!C:51!C |
U:A |
WC [cWW][XX] |
10.6 |
56.79; 52.3 |
4.48 |
-13.16 |
0.43 |
24.17 |
| snoRNA |
2OZB |
22!C:50!C |
C:G |
WC [cWW][XIX] |
10.75 |
50.54; 57.63 |
7.09 |
-9.82 |
0.17 |
22.85 |
| snoRNA |
2OZB |
23!C:49!C |
G:C |
WC [cWW][XIX] |
10.43 |
51.58; 59.04 |
7.46 |
-13.9 |
0.37 |
22.37 |
| snoRNA |
2OZB |
24!C:48!C |
U:G |
Wb [cWW][XXVIII] |
10.63 |
67.3; 33.26 |
34.05 |
-10.19 |
0.08 |
17.75 |
| snoRNA |
2OZB |
26!C:47!C |
G:C |
WC [cWW][XIX] |
10.8 |
54.68; 54.65 |
0.02 |
-1.33 |
0.09 |
5.51 |
| snoRNA |
2OZB |
27!C:46!C |
C:G |
WC [cWW][XIX] |
10.8 |
57.28; 54.71 |
2.57 |
-1.57 |
0.1 |
6.0 |
| snoRNA |
2OZB |
28!C:45!C |
C:G |
WC [cWW][XIX] |
10.68 |
56.44; 54.6 |
1.84 |
1.88 |
0.16 |
1.43 |
| snoRNA |
2OZB |
29!C:44!C |
A:A |
rS(sb:O2*-N1)_1 [tSS][-] |
8.68 |
100.91; 51.0 |
49.91 |
132.95 |
1.12 |
48.98 |
| snoRNA |
2OZB |
32!C:44!C |
G:A |
S [tSH][XI] |
9.07 |
102.59; 10.8 |
91.79 |
-25.72 |
0.4 |
27.26 |
| snoRNA |
2OZB |
33!C:43!C |
A:G |
S [tSH][XI] |
8.68 |
17.85; 102.95 |
85.1 |
-37.45 |
0.58 |
25.19 |
| snoRNA |
2OZB |
34!C:42!C |
G:C |
WC [cWW][XIX] |
10.59 |
49.7; 57.83 |
8.13 |
10.09 |
0.01 |
7.76 |
| snoRNA |
2OZB |
35!C:41!C |
G:C |
WC [cWW][XIX] |
10.73 |
52.14; 53.85 |
1.71 |
4.75 |
0.06 |
6.87 |
| snoRNA |
2OZB |
20!F:52!F |
A:U |
WC [cWW][XX] |
10.78 |
52.53; 53.19 |
0.66 |
-9.54 |
0.05 |
15.85 |
| snoRNA |
2OZB |
21!F:51!F |
U:A |
WC [cWW][XX] |
10.41 |
52.93; 64.23 |
11.3 |
-11.34 |
0.6 |
21.44 |
| snoRNA |
2OZB |
22!F:50!F |
C:G |
WC [cWW][XIX] |
10.56 |
59.48; 57.53 |
1.94 |
-4.08 |
0.13 |
6.84 |
| snoRNA |
2OZB |
23!F:49!F |
G:C |
WC [cWW][XIX] |
10.56 |
50.99; 60.02 |
9.03 |
-9.97 |
0.34 |
19.37 |
| snoRNA |
2OZB |
24!F:48!F |
U:G |
Wb [cWW][XXVIII] |
10.07 |
75.58; 43.99 |
31.59 |
-7.51 |
0.03 |
12.8 |
| snoRNA |
2OZB |
26!F:47!F |
G:C |
WC [cWW][XIX] |
10.66 |
55.26; 62.32 |
7.06 |
-3.87 |
0.39 |
10.84 |
| snoRNA |
2OZB |
27!F:46!F |
C:G |
WC [cWW][XIX] |
10.7 |
54.8; 52.83 |
1.97 |
-4.01 |
0.14 |
5.93 |
| snoRNA |
2OZB |
28!F:45!F |
C:G |
WC [cWW][XIX] |
10.94 |
55.12; 50.77 |
4.35 |
4.52 |
0.08 |
6.72 |
| snoRNA |
2OZB |
29!F:44!F |
A:A |
fS(sb:O2*-N1)_1 [---][-] |
8.68 |
104.25; 51.31 |
52.94 |
133.12 |
0.64 |
50.23 |
| snoRNA |
2OZB |
32!F:44!F |
G:A |
S [tSH][XI] |
8.94 |
103.93; 11.52 |
92.41 |
-27.14 |
0.37 |
28.28 |
| snoRNA |
2OZB |
33!F:43!F |
A:G |
S [tSH][XI] |
8.59 |
17.24; 104.13 |
86.89 |
-40.36 |
0.57 |
23.73 |
| snoRNA |
2OZB |
34!F:42!F |
G:C |
WC [cWW][XIX] |
10.63 |
52.96; 55.8 |
2.83 |
10.84 |
0.16 |
13.47 |
| snoRNA |
2OZB |
35!F:41!F |
G:C |
WC [cWW][XIX] |
10.64 |
52.76; 55.31 |
2.55 |
1.01 |
0.24 |
1.34 |