Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2P7E BPC Identified: 29 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 2P7E 2!A:13!B C:G WC [cWW][XIX] 10.41 54.19; 55.17 0.98 -11.45 0.01 19.97
HP_ribozyme 2P7E 3!A:12!B C:G WC [cWW][XIX] 10.52 53.38; 52.81 0.57 -6.89 0.07 8.84
HP_ribozyme 2P7E 4!A:11!B C:G WC [cWW][XIX] 10.44 59.62; 53.27 6.35 0.51 0.07 5.17
HP_ribozyme 2P7E 5!A:9!B A:A S [tSH][-] 10.11 80.33; 6.54 73.79 -93.05 0.3 11.05
HP_ribozyme 2P7E 2!B:13!P C:G WC [cWW][XIX] 10.55 53.8; 58.89 5.09 -8.47 0.0 10.38
HP_ribozyme 2P7E 3!B:12!P G:C WC [cWW][XIX] 10.58 52.24; 51.91 0.34 -11.9 0.2 14.81
HP_ribozyme 2P7E 4!B:11!P G:C WC [cWW][XIX] 10.47 55.68; 57.59 1.91 -7.72 0.08 12.49
HP_ribozyme 2P7E 5!B:10!P U:A WC [cWW][XX] 10.65 51.11; 56.86 5.75 -12.72 0.04 14.0
HP_ribozyme 2P7E 6!B:9!P G:C WC [cWW][XIX] 10.62 57.73; 55.8 1.92 -6.8 0.41 16.07
HP_ribozyme 2P7E 7!B:8!P A:C Wb* [cWW][-] 11.15 67.52; 46.02 21.5 -4.12 0.03 22.68
HP_ribozyme 2P7E 10!B:25!C A:C rpS(sb:O2*-N3) [cSS][-] 5.41 93.84; 150.11 56.27 -68.76 0.29 46.42
HP_ribozyme 2P7E 11!B:24!C G:A rpS(sb:O2*-N3) [---][-] 5.37 149.79; 93.22 56.57 -69.5 1.66 46.82
HP_ribozyme 2P7E 15!C:49!D G:C WC [cWW][XIX] 10.78 51.88; 56.05 4.16 -12.02 0.34 10.49
HP_ribozyme 2P7E 16!C:48!D G:C WC [cWW][XIX] 10.65 50.68; 54.8 4.12 -10.49 0.34 17.89
HP_ribozyme 2P7E 17!C:47!D C:G WC [cWW][XIX] 10.65 53.71; 55.44 1.73 -10.64 0.27 16.29
HP_ribozyme 2P7E 18!C:46!D A:U WC [cWW][XX] 10.44 57.56; 58.28 0.71 -6.24 0.01 11.23
HP_ribozyme 2P7E 19!C:45!D G:C WC [cWW][XIX] 10.44 54.7; 57.44 2.74 -0.56 0.03 11.01
HP_ribozyme 2P7E 20!C:44!D A:C Wb* [cWW][-] 10.34 77.02; 48.09 28.93 2.32 0.37 15.06
HP_ribozyme 2P7E 21!C:43!D G:A S [tSH][XI] 9.53 97.61; 3.3 94.31 44.45 0.02 8.03
HP_ribozyme 2P7E 22!C:41!D A:U rH_1 [tWH][XXIV] 9.72 20.76; 31.56 10.8 -169.09 0.46 13.07
HP_ribozyme 2P7E 23!C:40!D A:A rH [tWH][V] 12.5 12.92; 27.64 14.73 171.46 0.54 19.18
HP_ribozyme 2P7E 24!C:38!D A:A rpS* [---][-] 11.6 2.69; 50.8 48.12 158.98 0.69 15.99
HP_ribozyme 2P7E 25!C:6!P C:G WC [cWW][XIX] 10.52 53.19; 54.3 1.11 -15.99 0.55 21.89
HP_ribozyme 2P7E 26!C:36!D A:G WC [cWW][VIII] 12.69 45.98; 45.57 0.41 -10.72 0.19 20.33
HP_ribozyme 2P7E 27!C:35!D C:G WC [cWW][XIX] 10.63 54.63; 53.07 1.56 -18.61 0.15 21.62
HP_ribozyme 2P7E 28!C:34!D A:U WC [cWW][XX] 10.36 54.99; 56.37 1.38 -17.1 0.04 20.92
HP_ribozyme 2P7E 29!C:33!D C:G WC [cWW][XIX] 10.52 54.63; 53.93 0.7 -11.98 0.21 15.27
HP_ribozyme 2P7E 30!C:32!D G:C WC [cWW][XIX] 10.74 53.15; 52.2 0.95 -13.53 0.31 17.16
HP_ribozyme 2P7E 31!C:31!D A:U WC [cWW][XX] 10.58 58.72; 54.04 4.68 -1.28 0.22 6.86