Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2P7F BPC Identified: 31 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 2P7F 2!A:13!B C:G WC [cWW][XIX] 10.45 57.43; 56.54 0.89 -5.3 0.12 18.71
HP_ribozyme 2P7F 3!A:12!B C:G WC [cWW][XIX] 10.65 55.55; 55.07 0.48 -9.04 0.16 11.38
HP_ribozyme 2P7F 4!A:11!B C:G WC [cWW][XIX] 10.61 57.9; 53.45 4.45 -1.21 0.38 4.65
HP_ribozyme 2P7F 5!A:9!B A:A S [tSH][-] 10.49 75.43; 4.64 70.79 -75.42 0.21 8.34
HP_ribozyme 2P7F 6!A:25!C G:C WC [cWW][XIX] 10.63 55.45; 54.99 0.46 -12.62 0.37 15.73
HP_ribozyme 2P7F 7!A:8!B U:G S*_1 [tHS][-] 11.43 6.99; 87.04 80.05 75.0 0.93 16.75
HP_ribozyme 2P7F 8!A:7!B C:A Wb* [cWW][-] 11.56 42.1; 71.95 29.85 0.32 0.11 27.15
HP_ribozyme 2P7F 9!A:6!B C:G WC [cWW][XIX] 10.56 58.19; 56.5 1.69 -9.57 0.36 14.67
HP_ribozyme 2P7F 10!A:5!B A:U WC [cWW][XX] 10.49 56.87; 56.1 0.78 -14.03 0.05 18.76
HP_ribozyme 2P7F 11!A:4!B C:G WC [cWW][XIX] 10.41 62.24; 58.86 3.38 -9.14 0.51 17.4
HP_ribozyme 2P7F 12!A:3!B C:G WC [cWW][XIX] 10.35 63.11; 55.21 7.9 -9.04 0.0 13.02
HP_ribozyme 2P7F 13!A:2!B G:C WC [cWW][XIX] 10.57 57.91; 55.08 2.83 -5.17 0.07 7.72
HP_ribozyme 2P7F 10!B:25!C A:C rpS(sb:O2*-N3) [cSS][-] 5.47 94.79; 146.45 51.65 -68.23 0.91 50.03
HP_ribozyme 2P7F 11!B:24!C G:A rpS(sb:O2*-N3) [---][-] 5.43 150.19; 92.41 57.78 -70.04 1.5 47.85
HP_ribozyme 2P7F 15!C:49!D G:C WC [cWW][XIX] 10.77 54.34; 55.65 1.31 -7.45 0.41 4.69
HP_ribozyme 2P7F 16!C:48!D G:C WC [cWW][XIX] 10.64 50.44; 58.17 7.73 -12.07 0.06 17.88
HP_ribozyme 2P7F 17!C:47!D C:G WC [cWW][XIX] 10.71 55.2; 54.33 0.87 -9.39 0.44 15.88
HP_ribozyme 2P7F 18!C:46!D A:U WC [cWW][XX] 10.47 59.17; 57.53 1.64 -1.53 0.16 7.94
HP_ribozyme 2P7F 19!C:45!D G:C WC [cWW][XIX] 10.63 54.82; 57.59 2.77 -1.47 0.06 12.14
HP_ribozyme 2P7F 20!C:44!D A:C Wb* [cWW][-] 10.47 77.82; 49.98 27.84 -1.06 0.2 19.3
HP_ribozyme 2P7F 21!C:43!D G:A S [tSH][XI] 9.5 98.71; 4.62 94.08 42.83 0.29 4.45
HP_ribozyme 2P7F 22!C:41!D A:U rH_1 [tWH][XXIV] 9.71 21.01; 31.0 9.99 -163.28 0.3 12.31
HP_ribozyme 2P7F 23!C:40!D A:A rH [tWH][V] 12.44 14.16; 29.6 15.44 176.54 0.71 20.89
HP_ribozyme 2P7F 24!C:38!D A:A rpS* [---][-] 11.78 3.74; 49.26 45.52 159.53 0.46 15.21
HP_ribozyme 2P7F 26!C:36!D A:G WC [cWW][VIII] 12.69 47.54; 46.51 1.03 -12.84 0.08 24.93
HP_ribozyme 2P7F 27!C:36!D C:G WC_Mo [cWW][XIX] 10.07 75.88; 59.62 16.26 -21.05 2.09 14.7
HP_ribozyme 2P7F 27!C:35!D C:G WC [cWW][XIX] 10.61 53.46; 52.85 0.61 -19.59 0.52 23.22
HP_ribozyme 2P7F 28!C:34!D A:U WC [cWW][XX] 10.49 53.89; 55.71 1.82 -17.54 0.01 19.8
HP_ribozyme 2P7F 29!C:33!D C:G WC [cWW][XIX] 10.59 55.69; 54.97 0.72 -12.45 0.31 16.71
HP_ribozyme 2P7F 30!C:32!D G:C WC [cWW][XIX] 10.82 52.07; 55.5 3.42 -9.95 0.09 12.56
HP_ribozyme 2P7F 31!C:31!D A:U WC [cWW][XX] 10.56 60.18; 51.68 8.51 -1.82 0.16 8.62