Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2QBZ BPC Identified: 87 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswtich 2QBZ 15!X:174!X G:C WC [cWW][XIX] 11.1 53.66; 51.7 1.96 -6.49 0.35 8.55
Riboswtich 2QBZ 16!X:173!X G:C WC [cWW][XIX] 10.77 51.8; 54.95 3.15 -8.53 0.45 16.26
Riboswtich 2QBZ 17!X:172!X G:C WC [cWW][XIX] 10.86 51.93; 51.37 0.56 -5.78 0.43 15.21
Riboswtich 2QBZ 18!X:171!X C:G WC [cWW][XIX] 10.48 58.55; 53.36 5.19 -8.12 0.04 12.47
Riboswtich 2QBZ 19!X:170!X U:A WC [cWW][XX] 10.37 56.54; 56.2 0.34 -10.97 0.04 15.43
Riboswtich 2QBZ 20!X:169!X U:A WC [cWW][XX] 10.68 51.91; 52.54 0.63 -10.42 0.06 11.52
Riboswtich 2QBZ 21!X:168!X C:G WC [cWW][XIX] 10.66 54.56; 56.91 2.35 9.39 0.16 4.07
Riboswtich 2QBZ 22!X:163!X G:C WC [cWW][XIX] 10.66 54.05; 53.9 0.15 4.43 0.44 10.85
Riboswtich 2QBZ 22!X:71!X G:A rS [tSS][-] 7.97 83.76; 68.85 14.91 170.08 0.17 44.02
Riboswtich 2QBZ 23!X:162!X U:A WC [cWW][XX] 10.38 53.8; 60.66 6.86 6.46 0.28 11.62
Riboswtich 2QBZ 24!X:106!X U:A WC [cWW][XX] 10.52 52.52; 49.83 2.69 -22.95 0.72 34.69
Riboswtich 2QBZ 25!X:160!X A:C S [tSH][-] 9.89 2.81; 78.65 75.84 -53.36 0.94 22.98
Riboswtich 2QBZ 26!X:159!X G:U Wb [cWW][XXVIII] 10.37 40.9; 68.27 27.37 -0.2 0.24 12.6
Riboswtich 2QBZ 27!X:158!X G:C WC [cWW][XIX] 10.78 53.01; 53.48 0.48 -1.54 0.02 6.89
Riboswtich 2QBZ 28!X:157!X U:G Wb [cWW][XXVIII] 10.42 67.9; 41.57 26.33 -3.04 0.36 8.88
Riboswtich 2QBZ 29!X:156!X G:A S [tSH][XI] 9.21 97.05; 9.99 87.05 -36.33 0.03 23.73
Riboswtich 2QBZ 30!X:154!X A:A S [tSH][-] 9.5 2.01; 87.23 85.22 -1.46 0.25 9.71
Riboswtich 2QBZ 31!X:153!X G:U Wb [cWW][XXVIII] 10.54 38.4; 65.02 26.63 1.77 0.12 6.26
Riboswtich 2QBZ 32!X:152!X G:C WC [cWW][XIX] 10.67 54.79; 51.04 3.75 -0.14 0.29 6.38
Riboswtich 2QBZ 32!X:110!X G:G rS(ps:O1P-O2*)_1 [---][-] 7.09 144.2; 117.36 26.84 140.31 1.69 8.72
Riboswtich 2QBZ 33!X:151!X C:G WC [cWW][XIX] 10.64 55.26; 55.94 0.68 -2.36 0.26 10.79
Riboswtich 2QBZ 33!X:88!X C:A rpS(bs:O2-O2*) [cSS][-] 5.94 101.38; 153.0 51.62 -64.36 0.32 26.99
Riboswtich 2QBZ 34!X:150!X U:U Wb [cWW][XVI] 9.11 69.25; 40.88 28.37 -0.23 0.5 17.93
Riboswtich 2QBZ 34!X:35!X U:C pS [cSH][-] 7.02 145.2; 38.49 106.7 10.96 0.15 7.18
Riboswtich 2QBZ 35!X:150!X C:U sWC [---][-] 10.48 23.73; 81.08 57.35 15.17 0.24 18.68
Riboswtich 2QBZ 36!X:149!X C:G WC [cWW][XIX] 10.61 53.93; 55.95 2.02 -10.12 0.25 28.72
Riboswtich 2QBZ 37!X:148!X U:A WC [cWW][XX] 10.33 59.06; 57.05 2.01 -7.16 0.0 14.81
Riboswtich 2QBZ 38!X:147!X G:C WC [cWW][XIX] 10.71 58.14; 57.27 0.87 0.87 0.08 8.4
Riboswtich 2QBZ 39!X:146!X U:A WC [cWW][XX] 10.56 54.88; 62.79 7.9 -3.13 0.42 8.69
Riboswtich 2QBZ 40!X:145!X A:U WC [cWW][XX] 10.78 53.38; 55.42 2.04 -6.2 0.26 10.48
Riboswtich 2QBZ 41!X:144!X U:A WC [cWW][XX] 10.5 54.12; 50.04 4.08 -14.0 0.02 18.3
Riboswtich 2QBZ 42!X:143!X G:C WC [cWW][XIX] 10.67 56.02; 51.84 4.18 -20.88 0.13 26.2
Riboswtich 2QBZ 43!X:142!X G:C WC [cWW][XIX] 11.09 49.79; 49.75 0.03 -20.79 0.91 35.95
Riboswtich 2QBZ 44!X:141!X A:G WC [cWW][VIII] 13.0 52.5; 45.04 7.46 -11.91 0.39 29.57
Riboswtich 2QBZ 45!X:140!X G:U rH*_2 [tHW][-] 13.92 67.88; 8.96 58.92 112.48 0.62 19.78
Riboswtich 2QBZ 45!X:48!X G:A pfS_1 [---][-] 5.9 131.57; 91.54 40.03 -47.64 1.32 45.02
Riboswtich 2QBZ 46!X:139!X A:A rWC [---][-] 13.55 26.11; 44.98 18.87 -147.18 0.06 19.97
Riboswtich 2QBZ 46!X:138!X A:U rH_1 [tWH][XXIV] 9.78 16.37; 36.43 20.07 127.43 0.04 19.15
Riboswtich 2QBZ 48!X:125!X A:U rH_1 [tWH][XXIV] 10.35 15.01; 26.91 11.89 166.45 0.47 8.95
Riboswtich 2QBZ 50!X:124!X G:C WC [cWW][XIX] 10.59 55.99; 55.2 0.79 -11.39 0.06 16.25
Riboswtich 2QBZ 51!X:123!X C:G WC [cWW][XIX] 10.96 50.32; 59.78 9.45 -7.69 0.23 11.82
Riboswtich 2QBZ 52!X:122!X U:A WC [cWW][XX] 10.52 52.18; 62.07 9.89 -6.54 0.29 5.81
Riboswtich 2QBZ 53!X:121!X G:C WC [cWW][XIX] 10.67 54.88; 56.13 1.25 -10.71 0.03 19.47
Riboswtich 2QBZ 54!X:120!X C:G WC [cWW][XIX] 10.64 60.66; 51.98 8.68 -14.37 0.04 20.08
Riboswtich 2QBZ 55!X:118!X U:A Wb* [---][-] 9.08 60.07; 77.03 16.95 -8.89 0.0 11.65
Riboswtich 2QBZ 56!X:85!X G:U Wb [cWW][XXVIII] 10.44 38.42; 64.34 25.92 -10.78 0.05 15.78
Riboswtich 2QBZ 57!X:117!X C:A rpS(bs:O2-O2*) [cSS][-] 5.59 104.94; 148.88 43.95 -17.21 2.07 21.31
Riboswtich 2QBZ 57!X:84!X C:G WC [cWW][XIX] 10.5 52.82; 59.07 6.25 -10.48 0.65 24.4
Riboswtich 2QBZ 58!X:87!X C:A fS(sb:O2*-N1)_1 [tSS][-] 9.0 112.73; 41.3 71.43 -175.18 0.06 26.15
Riboswtich 2QBZ 58!X:83!X C:G WC [cWW][XIX] 10.68 53.93; 52.59 1.34 -1.25 0.06 8.71
Riboswtich 2QBZ 59!X:90!X C:A rpS(sb:O2*-N3) [cSS][-] 5.99 135.81; 88.61 47.2 -29.95 1.68 47.7
Riboswtich 2QBZ 59!X:82!X C:G WC [cWW][XIX] 10.6 54.6; 53.96 0.64 -2.6 0.11 5.4
Riboswtich 2QBZ 60!X:81!X A:U WC [cWW][XX] 10.4 56.67; 54.05 2.62 -3.95 0.09 8.87
Riboswtich 2QBZ 61!X:80!X A:A S [tSH][-] 9.24 88.78; 4.89 83.89 -35.47 0.87 20.58
Riboswtich 2QBZ 62!X:78!X A:C S(sb:O2*-N7) [---][-] 6.89 42.46; 84.48 42.03 152.5 0.85 14.76
Riboswtich 2QBZ 64!X:77!X A:C sWb [---][-] 10.86 16.7; 96.2 79.5 25.95 0.1 29.71
Riboswtich 2QBZ 65!X:76!X U:G Wb* [---][-] 10.77 49.81; 66.24 16.43 -3.17 0.12 29.39
Riboswtich 2QBZ 66!X:75!X G:C WC [cWW][XIX] 10.69 55.15; 54.08 1.07 -5.79 0.23 18.29
Riboswtich 2QBZ 67!X:74!X U:A WC [cWW][XX] 10.31 58.16; 56.1 2.06 -7.03 0.08 11.93
Riboswtich 2QBZ 68!X:105!X C:A rpS(sb:O2*-N3) [cSS][-] 5.83 139.99; 102.28 37.71 -33.45 0.53 10.08
Riboswtich 2QBZ 68!X:73!X C:G WC [cWW][XIX] 10.66 55.85; 55.97 0.12 1.59 0.17 7.85
Riboswtich 2QBZ 69!X:71!X C:A S(sb:O2*-N7) [---][-] 7.77 99.76; 30.54 69.22 -163.04 2.26 44.41
Riboswtich 2QBZ 70!X:164!X A:G rpS(sb:O2*-N3) [---][-] 5.57 92.36; 145.69 53.33 -82.84 0.99 49.05
Riboswtich 2QBZ 71!X:163!X A:C rpS(bs:O2-O2*) [cSS][-] 5.62 153.58; 99.8 53.79 -78.32 0.05 34.19
Riboswtich 2QBZ 72!X:105!X A:A rWb* [tWW][I] 13.68 21.8; 33.86 12.05 158.47 0.94 28.34
Riboswtich 2QBZ 73!X:106!X G:A rS [tSS][-] 9.23 76.76; 78.37 1.61 -160.72 0.16 21.04
Riboswtich 2QBZ 74!X:107!X A:G rS(ss:O2*-O2*)_2 [---][-] 5.47 150.1; 149.97 0.13 -96.38 0.94 26.67
Riboswtich 2QBZ 84!X:117!X G:A rS [tSS][-] 8.33 90.44; 55.08 35.35 157.03 0.52 36.02
Riboswtich 2QBZ 87!X:116!X A:U rH_1 [tWH][XXIV] 9.49 18.04; 37.02 18.98 -165.97 0.5 12.46
Riboswtich 2QBZ 88!X:151!X A:G rS [tSS][-] 8.04 64.58; 88.21 23.63 173.3 0.34 23.24
Riboswtich 2QBZ 89!X:152!X C:C rS(ss:O2*-O2*)_1 [---][-] 5.35 140.03; 149.23 9.2 -111.98 1.99 39.01
Riboswtich 2QBZ 91!X:115!X G:U Wb [cWW][XXVIII] 10.38 45.23; 69.27 24.05 3.44 0.16 4.4
Riboswtich 2QBZ 92!X:114!X A:U WC [cWW][XX] 10.28 57.31; 56.09 1.22 -3.11 0.13 11.41
Riboswtich 2QBZ 93!X:113!X A:U WC [cWW][XX] 10.42 54.3; 57.82 3.51 -6.26 0.0 9.09
Riboswtich 2QBZ 94!X:112!X A:U WC [cWW][XX] 10.45 52.26; 57.61 5.35 -10.66 0.32 18.75
Riboswtich 2QBZ 95!X:111!X U:A WC [cWW][XX] 10.64 53.1; 55.36 2.26 -12.23 0.08 18.14
Riboswtich 2QBZ 96!X:110!X C:G WC [cWW][XIX] 10.68 54.98; 56.31 1.33 -13.25 0.11 18.75
Riboswtich 2QBZ 97!X:109!X A:U WC [cWW][XX] 10.38 59.25; 59.7 0.44 -9.12 0.03 14.18
Riboswtich 2QBZ 98!X:108!X U:G Wb [cWW][XXVIII] 10.52 68.14; 42.96 25.18 -7.73 0.0 16.23
Riboswtich 2QBZ 99!X:155!X C:A rpS(bs:O2-O2*) [cSS][-] 5.78 107.72; 137.78 30.06 -41.45 0.7 45.37
Riboswtich 2QBZ 99!X:107!X C:G WC [cWW][XIX] 10.6 58.24; 54.94 3.3 2.92 0.26 1.31
Riboswtich 2QBZ 100!X:106!X G:A S [tSH][XI] 9.54 100.78; 9.55 91.22 -53.24 0.69 5.44
Riboswtich 2QBZ 101!X:167!X A:U H_1 [cWH][XXIII] 8.32 50.81; 60.62 9.82 -6.76 0.37 20.93
Riboswtich 2QBZ 103!X:167!X A:U pfS [cSW][-] 9.38 33.81; 113.25 79.45 -56.65 1.11 52.58
Riboswtich 2QBZ 107!X:155!X G:A rS [tSS][-] 8.13 87.61; 53.95 33.66 146.62 0.8 46.32
Riboswtich 2QBZ 119!X:120!X U:G rS(sp:O2*-O1P) [---][-] 8.59 148.63; 83.82 64.82 -158.33 0.39 70.89
Riboswtich 2QBZ 126!X:137!X G:C Wb [---][-] 10.37 53.21; 65.52 12.31 -21.29 0.24 27.03