Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2QEK BPC Identified: 21 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
vRNA 2QEK 1!A:23!B C:G WC [cWW][XIX] 10.4 56.56; 55.82 0.75 -17.55 0.13 26.39
vRNA 2QEK 2!A:22!B U:A WC [cWW][XX] 10.23 57.03; 58.5 1.47 -7.85 0.09 14.76
vRNA 2QEK 3!A:21!B U:A WC [cWW][XX] 10.37 57.15; 59.02 1.87 -7.16 0.09 11.31
vRNA 2QEK 4!A:20!B G:C WC [cWW][XIX] 10.57 55.86; 57.17 1.31 -5.64 0.04 9.48
vRNA 2QEK 5!A:19!B C:G WC [cWW][XIX] 10.6 54.77; 52.53 2.24 -6.91 0.01 12.4
vRNA 2QEK 6!A:18!B U:A WC [cWW][XX] 10.39 58.47; 56.34 2.13 -9.28 0.16 14.89
vRNA 2QEK 7!A:17!B G:C WC [cWW][XIX] 10.6 56.33; 55.96 0.37 -7.08 0.51 17.08
vRNA 2QEK 8!A:16!B A:A Wb [cWW][-] 11.95 72.13; 50.83 21.3 -7.26 0.32 21.33
vRNA 2QEK 10!A:15!B G:C WC [cWW][XIX] 10.39 58.92; 57.47 1.45 -6.35 0.43 22.68
vRNA 2QEK 11!A:14!B U:A WC [cWW][XX] 10.62 54.55; 54.83 0.27 -5.09 0.16 8.46
vRNA 2QEK 12!A:13!B G:C WC [cWW][XIX] 10.68 56.2; 53.39 2.81 -4.17 0.22 8.78
vRNA 2QEK 13!A:12!B C:G WC [cWW][XIX] 10.55 55.69; 53.85 1.84 -7.9 0.08 8.34
vRNA 2QEK 14!A:11!B A:U WC [cWW][XX] 10.53 55.67; 55.32 0.35 -11.76 0.11 14.89
vRNA 2QEK 15!A:10!B C:G WC [cWW][XIX] 10.71 55.12; 52.47 2.66 -17.37 0.05 16.54
vRNA 2QEK 17!A:7!B C:G WC [cWW][XIX] 10.54 55.91; 54.45 1.47 -13.56 0.04 18.7
vRNA 2QEK 18!A:6!B A:U WC [cWW][XX] 10.57 54.31; 53.22 1.09 -14.75 0.29 10.84
vRNA 2QEK 19!A:5!B G:C WC [cWW][XIX] 10.91 50.77; 53.12 2.35 -13.02 0.07 18.96
vRNA 2QEK 20!A:4!B C:G WC [cWW][XIX] 10.65 56.44; 53.97 2.47 -7.1 0.13 14.87
vRNA 2QEK 21!A:3!B A:U WC [cWW][XX] 10.26 57.24; 56.89 0.34 -7.11 0.02 11.05
vRNA 2QEK 22!A:2!B A:U WC [cWW][XX] 10.42 55.87; 56.71 0.84 -6.11 0.03 9.87
vRNA 2QEK 23!A:1!B G:C WC [cWW][XIX] 10.53 55.23; 56.71 1.49 -7.88 0.17 18.36