Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2QUS BPC Identified: 59 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Ribozyme 2QUS 1!A:64!A G:C WC [cWW][XIX] 10.87 55.58; 52.71 2.86 -4.35 0.57 14.78
Ribozyme 2QUS 2!A:63!A G:C WC [cWW][XIX] 10.57 56.04; 53.92 2.12 -3.08 0.23 8.97
Ribozyme 2QUS 3!A:62!A G:C WC [cWW][XIX] 10.68 50.15; 51.63 1.48 -2.08 0.19 11.64
Ribozyme 2QUS 4!A:61!A A:U WC [cWW][XX] 10.65 56.15; 54.41 1.73 -4.98 0.05 6.69
Ribozyme 2QUS 5!A:60!A G:C WC [cWW][XIX] 10.67 50.32; 55.57 5.25 -10.86 0.13 13.98
Ribozyme 2QUS 6!A:59!A C:G WC [cWW][XIX] 10.66 52.33; 53.01 0.67 -7.72 0.4 15.4
Ribozyme 2QUS 7!A:58!A C:G WC [cWW][XIX] 10.74 54.76; 52.54 2.22 0.21 0.23 10.94
Ribozyme 2QUS 8!A:57!A C:G WC [cWW][XIX] 10.65 50.02; 57.22 7.2 -5.71 0.17 13.02
Ribozyme 2QUS 9!A:56!A U:A WC [cWW][XX] 10.12 54.71; 54.26 0.45 -5.22 0.25 9.24
Ribozyme 2QUS 10!A:55!A G:C WC [cWW][XIX] 10.48 52.83; 61.24 8.41 -10.53 0.36 14.85
Ribozyme 2QUS 11!A:54!A U:A WC [cWW][XX] 10.56 56.67; 52.1 4.57 -5.6 0.22 6.82
Ribozyme 2QUS 12!A:52!A C:A rH_2_Mo [---][-] 10.6 69.82; 3.86 65.95 -127.86 0.97 20.81
Ribozyme 2QUS 13!A:31!A A:U WC [cWW][XX] 10.29 57.94; 58.62 0.68 -12.36 0.02 14.68
Ribozyme 2QUS 14!A:30!A C:G WC [cWW][XIX] 10.57 54.74; 51.55 3.19 -9.28 0.45 15.81
Ribozyme 2QUS 15!A:29!A C:G WC [cWW][XIX] 10.64 51.08; 53.76 2.67 -5.47 0.26 9.45
Ribozyme 2QUS 16!A:28!A G:C WC [cWW][XIX] 10.6 53.41; 55.03 1.61 -10.05 0.06 13.65
Ribozyme 2QUS 17!A:64!B G:C rS(ss:O2*-O2*) [---][-] 5.9 154.34; 140.15 14.18 -111.38 1.58 7.76
Ribozyme 2QUS 17!A:27!A G:C WC [cWW][XIX] 10.53 53.85; 53.94 0.09 -8.88 0.33 24.24
Ribozyme 2QUS 18!A:26!A A:U WC [cWW][XX] 10.42 56.62; 51.97 4.65 -8.02 0.93 21.96
Ribozyme 2QUS 19!A:46!A U:A rH_1 [tWH][XXIV] 9.49 31.82; 18.82 12.99 149.35 0.52 14.69
Ribozyme 2QUS 20!A:21!A G:U pS* [cHS][-] 6.36 139.24; 57.84 81.4 4.9 0.14 4.19
Ribozyme 2QUS 24!A:46!A U:A WC [cWW][XX] 10.35 54.68; 60.77 6.09 -1.58 0.5 17.64
Ribozyme 2QUS 25!A:47!A U:G H_2 [---][-] 9.59 65.09; 25.75 39.34 -8.45 0.86 68.11
Ribozyme 2QUS 30!A:3!B G:G rS(ss:O2*-O2*)_1 [---][-] 5.73 146.22; 159.59 13.37 -156.74 0.64 18.87
Ribozyme 2QUS 32!A:37!A C:G WC [cWW][XIX] 10.56 55.84; 52.73 3.11 3.99 0.17 8.4
Ribozyme 2QUS 33!A:35!A U:A S(sb:O2*-N7) [---][-] 7.01 81.28; 36.64 44.64 -161.43 0.05 32.95
Ribozyme 2QUS 34!A:54!A G:A pfS(sb:O2*-N3) [---][-] 5.52 134.68; 89.42 45.26 -57.34 2.39 53.86
Ribozyme 2QUS 39!A:50!A G:C WC [cWW][XIX] 10.47 56.44; 61.92 5.48 -5.89 0.17 7.06
Ribozyme 2QUS 40!A:49!A U:A WC [cWW][XX] 10.38 55.58; 56.69 1.11 -5.61 0.54 16.31
Ribozyme 2QUS 41!A:48!A C:G WC [cWW][XIX] 10.73 54.38; 53.55 0.83 1.14 0.38 15.29
Ribozyme 2QUS 42!A:47!A C:G WC [cWW][XIX] 10.45 58.75; 54.34 4.41 2.14 0.42 6.65
Ribozyme 2QUS 1!B:64!B G:C WC [cWW][XIX] 10.45 51.87; 59.13 7.26 -7.29 0.21 14.72
Ribozyme 2QUS 2!B:63!B G:C WC [cWW][XIX] 10.82 49.78; 52.22 2.44 -0.66 0.17 10.25
Ribozyme 2QUS 3!B:62!B G:C WC [cWW][XIX] 10.73 50.42; 55.94 5.52 -4.2 0.13 8.66
Ribozyme 2QUS 4!B:61!B A:U WC [cWW][XX] 10.25 55.44; 57.16 1.71 -7.88 0.01 12.78
Ribozyme 2QUS 5!B:60!B G:C WC [cWW][XIX] 10.6 55.22; 53.31 1.9 -5.78 0.36 12.39
Ribozyme 2QUS 6!B:59!B C:G WC [cWW][XIX] 10.66 52.65; 56.13 3.48 -0.23 0.21 7.14
Ribozyme 2QUS 7!B:58!B C:G WC [cWW][XIX] 10.58 53.9; 54.15 0.25 1.7 0.4 18.79
Ribozyme 2QUS 8!B:57!B C:G WC [cWW][XIX] 10.64 50.2; 52.89 2.69 -1.07 0.31 14.66
Ribozyme 2QUS 9!B:56!B U:A WC [cWW][XX] 10.4 55.96; 58.57 2.61 -6.44 0.49 15.42
Ribozyme 2QUS 10!B:55!B G:C WC [cWW][XIX] 10.54 56.36; 54.91 1.45 -7.47 0.43 18.22
Ribozyme 2QUS 11!B:54!B U:A WC [cWW][XX] 10.65 52.18; 55.62 3.44 -5.59 0.12 5.35
Ribozyme 2QUS 12!B:52!B C:A rH_2_Mo [---][-] 10.67 66.5; 3.42 63.08 -103.1 0.76 20.85
Ribozyme 2QUS 13!B:31!B A:U WC [cWW][XX] 10.28 53.91; 56.82 2.9 -11.32 0.0 15.5
Ribozyme 2QUS 14!B:30!B C:G WC [cWW][XIX] 10.66 54.75; 54.28 0.47 -13.42 0.53 21.72
Ribozyme 2QUS 15!B:29!B C:G WC [cWW][XIX] 10.74 48.43; 53.01 4.58 -6.02 0.04 18.18
Ribozyme 2QUS 16!B:28!B G:C WC [cWW][XIX] 10.63 53.08; 57.39 4.31 -3.69 0.23 7.55
Ribozyme 2QUS 17!B:27!B G:C WC [cWW][XIX] 10.52 54.72; 56.57 1.85 -8.53 0.2 11.14
Ribozyme 2QUS 18!B:26!B A:U WC [cWW][XX] 10.61 46.81; 55.14 8.33 -6.65 0.47 15.63
Ribozyme 2QUS 19!B:46!B U:A rH_1 [tWH][XXIV] 9.62 36.68; 15.31 21.37 148.83 0.22 8.8
Ribozyme 2QUS 24!B:46!B U:A WC [cWW][XX] 10.12 54.65; 62.13 7.48 -1.77 0.54 15.76
Ribozyme 2QUS 32!B:37!B C:G WC [cWW][XIX] 10.58 54.33; 52.52 1.82 1.06 0.27 7.97
Ribozyme 2QUS 33!B:35!B U:A S(sb:O2*-N7) [---][-] 6.92 78.19; 35.96 42.23 -167.9 0.71 30.07
Ribozyme 2QUS 34!B:54!B G:A rpS(sb:O2*-N3) [---][-] 5.6 138.64; 93.66 44.99 -60.73 2.36 53.25
Ribozyme 2QUS 38!B:51!B A:A pfS [cSW][-] 9.51 31.57; 116.48 84.91 -13.82 0.44 10.89
Ribozyme 2QUS 39!B:50!B G:C WC [cWW][XIX] 10.38 54.44; 61.78 7.34 -4.33 0.63 10.05
Ribozyme 2QUS 40!B:49!B U:A WC [cWW][XX] 10.61 55.29; 55.26 0.03 3.46 0.23 2.44
Ribozyme 2QUS 41!B:48!B C:G WC [cWW][XIX] 10.71 60.73; 54.66 6.06 -0.46 0.3 3.99
Ribozyme 2QUS 42!B:47!B C:G WC [cWW][XIX] 10.78 52.72; 50.86 1.86 2.37 0.06 4.52