Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2QUW BPC Identified: 60 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HH_ribozyme 2QUW 1!A:64!B G:C WC [cWW][XIX] 10.71 53.39; 53.87 0.48 -7.67 0.46 16.8
HH_ribozyme 2QUW 2!A:63!B G:C WC [cWW][XIX] 10.67 56.36; 52.44 3.92 -6.05 0.4 12.33
HH_ribozyme 2QUW 3!A:62!B G:C WC [cWW][XIX] 10.6 56.15; 57.17 1.02 -6.61 0.2 5.64
HH_ribozyme 2QUW 4!A:61!B A:U WC [cWW][XX] 10.63 54.42; 53.29 1.13 -8.55 0.08 12.58
HH_ribozyme 2QUW 5!A:60!B G:C WC [cWW][XIX] 10.75 50.43; 51.17 0.75 -11.08 0.08 14.29
HH_ribozyme 2QUW 6!A:59!B C:G WC [cWW][XIX] 10.86 49.74; 52.43 2.68 -10.74 0.07 17.67
HH_ribozyme 2QUW 7!A:58!B C:G WC [cWW][XIX] 11.08 50.96; 53.32 2.37 -4.75 0.06 14.52
HH_ribozyme 2QUW 8!A:57!B C:G WC [cWW][XIX] 10.99 50.42; 56.34 5.92 -5.52 0.12 8.42
HH_ribozyme 2QUW 9!A:56!B U:A WC [cWW][XX] 10.44 50.33; 58.93 8.6 -6.88 0.11 9.99
HH_ribozyme 2QUW 10!A:55!B G:C WC [cWW][XIX] 10.65 53.57; 53.03 0.54 -8.97 0.23 13.67
HH_ribozyme 2QUW 11!A:54!B U:A WC [cWW][XX] 10.7 53.18; 52.25 0.93 -7.89 0.15 9.65
HH_ribozyme 2QUW 12!A:52!B C:A rH_2_Mo [---][-] 10.58 69.61; 4.63 64.99 -111.39 0.55 21.43
HH_ribozyme 2QUW 13!B:31!B A:U WC [cWW][XX] 10.22 56.0; 60.87 4.88 -9.75 0.04 16.02
HH_ribozyme 2QUW 14!B:30!B C:G WC [cWW][XIX] 10.69 54.25; 55.0 0.74 -9.46 0.33 13.06
HH_ribozyme 2QUW 15!B:29!B C:G WC [cWW][XIX] 10.92 50.61; 53.49 2.88 -6.58 0.29 16.03
HH_ribozyme 2QUW 16!B:28!B G:C WC [cWW][XIX] 10.75 54.65; 54.21 0.44 -6.66 0.09 13.19
HH_ribozyme 2QUW 17!B:64!D G:C rS(ss:O2*-O2*) [---][-] 5.91 152.88; 133.92 18.96 -109.06 1.98 6.7
HH_ribozyme 2QUW 17!B:27!B G:C WC [cWW][XIX] 10.63 55.93; 55.58 0.35 -10.77 0.3 23.15
HH_ribozyme 2QUW 18!B:26!B A:U WC [cWW][XX] 10.63 56.6; 53.5 3.1 -7.79 0.85 20.12
HH_ribozyme 2QUW 19!B:46!B U:A rH_1 [tWH][XXIV] 9.59 31.24; 18.31 12.93 150.92 0.48 14.11
HH_ribozyme 2QUW 20!B:21!B G:U pS* [cHS][-] 6.73 136.63; 57.25 79.38 11.81 0.41 8.89
HH_ribozyme 2QUW 24!B:46!B U:A WC [cWW][XX] 10.4 53.94; 58.1 4.16 -2.23 0.46 12.12
HH_ribozyme 2QUW 25!B:47!B U:G H_2 [---][-] 9.99 60.5; 22.27 38.22 -19.84 0.22 69.0
HH_ribozyme 2QUW 30!B:3!C G:G rS(ss:O2*-O2*)_1 [---][-] 5.98 148.93; 161.89 12.96 -158.11 0.32 18.46
HH_ribozyme 2QUW 32!B:37!B C:G WC [cWW][XIX] 10.69 54.75; 51.67 3.08 5.52 0.17 12.6
HH_ribozyme 2QUW 33!B:35!B U:A S(sb:O2*-N7) [---][-] 6.92 81.1; 38.24 42.86 -159.13 0.05 33.41
HH_ribozyme 2QUW 34!B:54!B G:A pfS(sb:O2*-N3) [---][-] 5.42 140.06; 89.43 50.63 -59.0 2.11 48.9
HH_ribozyme 2QUW 38!B:51!B A:A pfS [cSW][-] 10.37 30.61; 109.78 79.18 -1.71 0.61 10.84
HH_ribozyme 2QUW 39!B:50!B G:C WC [cWW][XIX] 10.16 54.89; 66.1 11.21 -4.07 0.04 4.11
HH_ribozyme 2QUW 40!B:49!B U:A WC [cWW][XX] 10.76 55.04; 52.99 2.04 -6.46 0.31 12.98
HH_ribozyme 2QUW 41!B:48!B C:G WC [cWW][XIX] 10.87 56.82; 50.66 6.16 -1.2 0.4 10.91
HH_ribozyme 2QUW 42!B:47!B C:G WC [cWW][XIX] 10.6 58.39; 51.81 6.58 0.96 0.33 6.1
HH_ribozyme 2QUW 1!C:64!D G:C WC [cWW][XIX] 10.64 51.07; 56.41 5.33 -2.26 0.3 16.58
HH_ribozyme 2QUW 2!C:63!D G:C WC [cWW][XIX] 10.55 56.89; 51.37 5.52 -0.57 0.48 12.48
HH_ribozyme 2QUW 3!C:62!D G:C WC [cWW][XIX] 10.7 54.15; 52.88 1.27 -5.95 0.21 10.52
HH_ribozyme 2QUW 4!C:61!D A:U WC [cWW][XX] 10.36 59.09; 55.3 3.78 -5.48 0.17 9.31
HH_ribozyme 2QUW 5!C:60!D G:C WC [cWW][XIX] 10.72 49.9; 55.3 5.4 -10.55 0.17 11.83
HH_ribozyme 2QUW 6!C:59!D C:G WC [cWW][XIX] 10.77 53.15; 53.03 0.11 0.34 0.02 2.57
HH_ribozyme 2QUW 7!C:58!D C:G WC [cWW][XIX] 10.93 51.51; 51.11 0.4 0.6 0.09 12.52
HH_ribozyme 2QUW 8!C:57!D C:G WC [cWW][XIX] 10.39 56.16; 59.64 3.48 -0.95 0.01 6.88
HH_ribozyme 2QUW 9!C:56!D U:A WC [cWW][XX] 10.29 55.19; 56.77 1.58 -6.39 0.06 16.22
HH_ribozyme 2QUW 10!C:55!D G:C WC [cWW][XIX] 10.51 55.62; 57.0 1.38 -8.94 0.41 18.88
HH_ribozyme 2QUW 11!C:54!D U:A WC [cWW][XX] 10.57 53.81; 53.28 0.54 -11.19 0.45 9.13
HH_ribozyme 2QUW 12!C:52!D C:A rH_2_Mo [---][-] 10.65 66.76; 2.09 64.67 -107.57 0.26 17.65
HH_ribozyme 2QUW 13!D:31!D A:U WC [cWW][XX] 10.53 51.5; 53.55 2.05 -10.41 0.06 12.76
HH_ribozyme 2QUW 14!D:30!D C:G WC [cWW][XIX] 10.82 51.05; 53.58 2.53 -12.1 0.24 19.79
HH_ribozyme 2QUW 15!D:29!D C:G WC [cWW][XIX] 10.82 52.32; 56.49 4.17 -6.56 0.08 14.12
HH_ribozyme 2QUW 16!D:28!D G:C WC [cWW][XIX] 10.7 52.08; 54.41 2.33 -6.09 0.05 12.33
HH_ribozyme 2QUW 17!D:27!D G:C WC [cWW][XIX] 10.78 54.78; 53.41 1.37 -9.08 0.27 14.68
HH_ribozyme 2QUW 18!D:26!D A:U WC [cWW][XX] 10.63 55.58; 54.02 1.55 -9.26 0.3 16.32
HH_ribozyme 2QUW 19!D:46!D U:A rH_1 [tWH][XXIV] 9.85 33.54; 17.85 15.69 149.47 0.0 8.78
HH_ribozyme 2QUW 24!D:46!D U:A WC [cWW][XX] 10.57 51.98; 57.33 5.36 -4.79 0.53 23.0
HH_ribozyme 2QUW 32!D:37!D C:G WC [cWW][XIX] 10.65 51.19; 52.36 1.17 -0.43 0.28 7.42
HH_ribozyme 2QUW 33!D:35!D U:A S(sb:O2*-N7) [---][-] 6.89 77.74; 34.2 43.54 -166.25 0.38 33.25
HH_ribozyme 2QUW 34!D:54!D G:A pfS(sb:O2*-N3) [---][-] 5.71 134.11; 89.76 44.35 -61.6 2.22 55.71
HH_ribozyme 2QUW 38!D:51!D A:A pfS [cSW][-] 9.38 36.68; 118.52 81.84 -17.77 0.56 13.73
HH_ribozyme 2QUW 39!D:50!D G:C WC [cWW][XIX] 10.5 57.86; 62.47 4.61 -7.66 0.26 16.65
HH_ribozyme 2QUW 40!D:49!D U:A WC [cWW][XX] 10.66 51.7; 56.81 5.1 0.69 0.34 8.52
HH_ribozyme 2QUW 41!D:48!D C:G WC [cWW][XIX] 10.76 55.93; 50.89 5.04 0.29 0.2 3.61
HH_ribozyme 2QUW 42!D:47!D C:G WC [cWW][XIX] 10.6 54.29; 49.16 5.13 -0.21 0.2 5.66