Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2R1S
BPC Identified: 13
Ambiguities: 0
| dsRNA |
2R1S |
1!A:26!B |
G:C |
WC [cWW][XIX] |
10.73 |
53.63; 55.43 |
1.8 |
-6.35 |
0.17 |
8.55 |
| dsRNA |
2R1S |
2!A:25!B |
C:G |
WC [cWW][XIX] |
10.59 |
55.65; 55.31 |
0.34 |
-9.99 |
0.07 |
13.81 |
| dsRNA |
2R1S |
3!A:24!B |
G:C |
WC [cWW][XIX] |
10.75 |
52.49; 52.96 |
0.47 |
-7.36 |
0.18 |
13.81 |
| dsRNA |
2R1S |
4!A:23!B |
U:A |
WC [cWW][XX] |
10.47 |
58.16; 54.81 |
3.35 |
-1.86 |
0.01 |
5.25 |
| dsRNA |
2R1S |
5!A:22!B |
U:A |
WC [cWW][XX] |
10.14 |
59.63; 60.83 |
1.2 |
-3.9 |
0.18 |
8.08 |
| dsRNA |
2R1S |
6!A:21!B |
U:A |
WC [cWW][XX] |
10.64 |
56.12; 55.13 |
0.99 |
-6.99 |
0.03 |
11.01 |
| dsRNA |
2R1S |
7!A:20!B |
G:G |
H_1 [cWH][VI] |
11.4 |
64.63; 31.55 |
33.08 |
8.15 |
0.33 |
6.98 |
| dsRNA |
2R1S |
8!A:19!B |
A:U |
WC [cWW][XX] |
10.73 |
52.89; 55.66 |
2.76 |
-1.1 |
0.32 |
9.1 |
| dsRNA |
2R1S |
9!A:18!B |
A:U |
WC [cWW][XX] |
10.3 |
57.85; 58.69 |
0.84 |
-6.17 |
0.17 |
13.03 |
| dsRNA |
2R1S |
10!A:17!B |
A:U |
WC [cWW][XX] |
10.32 |
55.92; 59.89 |
3.97 |
-1.81 |
0.09 |
9.04 |
| dsRNA |
2R1S |
11!A:16!B |
C:G |
WC [cWW][XIX] |
10.7 |
55.63; 52.01 |
3.61 |
-2.79 |
0.1 |
7.47 |
| dsRNA |
2R1S |
12!A:15!B |
G:C |
WC [cWW][XIX] |
10.63 |
55.83; 55.29 |
0.53 |
-4.55 |
0.08 |
7.91 |
| dsRNA |
2R1S |
13!A:14!B |
C:G |
WC [cWW][XIX] |
10.7 |
56.11; 53.37 |
2.74 |
-2.01 |
0.11 |
4.33 |