Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2UWM
BPC Identified: 20
Ambiguities: 0
mRNA |
2UWM |
13!C:35!C |
G:C |
WC [cWW][XIX] |
10.78 |
52.83; 55.73 |
2.89 |
-3.09 |
0.13 |
7.26 |
mRNA |
2UWM |
14!C:34!C |
G:C |
WC [cWW][XIX] |
10.51 |
56.48; 57.43 |
0.95 |
-17.69 |
0.15 |
18.52 |
mRNA |
2UWM |
15!C:33!C |
C:G |
WC [cWW][XIX] |
10.74 |
57.87; 51.96 |
5.92 |
-13.85 |
0.05 |
16.22 |
mRNA |
2UWM |
16!C:32!C |
G:C |
WC [cWW][XIX] |
10.68 |
54.44; 57.95 |
3.52 |
-12.93 |
0.37 |
17.62 |
mRNA |
2UWM |
17!C:31!C |
U:A |
H_1 [cWH][XXIII] |
10.42 |
55.69; 24.48 |
31.21 |
-4.35 |
0.2 |
16.84 |
mRNA |
2UWM |
18!C:30!C |
U:A |
WC [cWW][XX] |
10.59 |
53.58; 54.0 |
0.42 |
-12.21 |
0.15 |
13.96 |
mRNA |
2UWM |
19!C:29!C |
G:C |
WC [cWW][XIX] |
10.83 |
53.34; 54.06 |
0.72 |
-8.6 |
0.26 |
14.94 |
mRNA |
2UWM |
20!C:28!C |
C:G |
WC [cWW][XIX] |
10.92 |
51.91; 50.84 |
1.08 |
-10.54 |
0.4 |
15.37 |
mRNA |
2UWM |
21!C:27!C |
C:G |
WC [cWW][XIX] |
11.04 |
51.56; 51.74 |
0.18 |
-11.79 |
0.1 |
17.19 |
mRNA |
2UWM |
22!C:25!C |
G:C |
WC [cWW][XIX] |
10.68 |
52.63; 53.48 |
0.86 |
5.23 |
0.24 |
11.95 |
mRNA |
2UWM |
13!D:35!D |
G:C |
WC [cWW][XIX] |
10.72 |
49.93; 53.64 |
3.7 |
-3.23 |
0.02 |
4.7 |
mRNA |
2UWM |
14!D:34!D |
G:C |
WC [cWW][XIX] |
10.73 |
53.74; 55.23 |
1.49 |
-14.07 |
0.02 |
16.2 |
mRNA |
2UWM |
15!D:33!D |
C:G |
WC [cWW][XIX] |
10.67 |
53.78; 52.06 |
1.72 |
-14.13 |
0.07 |
14.31 |
mRNA |
2UWM |
16!D:32!D |
G:C |
WC [cWW][XIX] |
10.65 |
53.19; 55.11 |
1.92 |
-15.89 |
0.34 |
20.11 |
mRNA |
2UWM |
17!D:31!D |
U:A |
WC [cWW][XX] |
10.74 |
55.55; 53.07 |
2.48 |
-16.39 |
0.14 |
23.84 |
mRNA |
2UWM |
18!D:30!D |
U:A |
WC [cWW][XX] |
10.72 |
52.42; 55.03 |
2.61 |
-12.72 |
0.06 |
18.78 |
mRNA |
2UWM |
19!D:29!D |
G:C |
WC [cWW][XIX] |
10.78 |
53.73; 51.12 |
2.62 |
-12.41 |
0.0 |
19.46 |
mRNA |
2UWM |
20!D:28!D |
C:G |
WC [cWW][XIX] |
10.74 |
57.32; 49.71 |
7.6 |
-12.02 |
0.13 |
19.41 |
mRNA |
2UWM |
21!D:27!D |
C:G |
WC [cWW][XIX] |
10.75 |
54.92; 53.51 |
1.41 |
-15.34 |
0.13 |
16.38 |
mRNA |
2UWM |
22!D:25!D |
G:C |
WC [cWW][XIX] |
10.54 |
52.25; 52.58 |
0.33 |
2.97 |
0.43 |
19.54 |