Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2V3C BPC Identified: 96 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
SRP_RNA 2V3C 142!M:236!M G:C WC_Mo [cWW][XIX] 10.86 52.95; 64.4 11.45 -11.86 0.03 20.78
SRP_RNA 2V3C 143!M:235!M G:U Wb [cWW][XXVIII] 10.13 40.53; 61.32 20.79 -18.9 0.18 22.26
SRP_RNA 2V3C 144!M:234!M C:G WC_Mo [cWW][XIX] 10.64 63.86; 55.17 8.69 -22.85 0.45 24.87
SRP_RNA 2V3C 145!M:233!M G:C WC [cWW][XIX] 11.11 56.87; 51.35 5.53 -15.68 0.0 25.26
SRP_RNA 2V3C 146!M:232!M G:A WC [cWW][VIII] 12.94 38.99; 44.53 5.54 -17.63 0.12 22.49
SRP_RNA 2V3C 147!M:183!M U:U Wb [cWW][XVI] 8.83 37.79; 73.93 36.15 -9.32 0.75 22.53
SRP_RNA 2V3C 148!M:182!M G:C WC [cWW][XIX] 11.19 52.11; 48.27 3.84 -4.05 0.02 19.64
SRP_RNA 2V3C 149!M:181!M G:C WC [cWW][XIX] 11.16 54.41; 47.55 6.86 -4.41 0.05 6.84
SRP_RNA 2V3C 150!M:180!M G:C WC_Mo [cWW][XIX] 11.06 57.04; 60.39 3.35 -6.31 0.07 4.77
SRP_RNA 2V3C 151!M:179!M G:C WC [cWW][XIX] 10.08 63.16; 53.45 9.71 6.0 0.22 8.51
SRP_RNA 2V3C 152!M:178!M G:C Wb* [---][-] 11.39 57.79; 45.7 12.08 1.41 0.67 6.36
SRP_RNA 2V3C 154!M:175!M G:U Wb [cWW][XXVIII] 10.74 47.29; 57.49 10.2 -8.13 0.36 11.37
SRP_RNA 2V3C 155!M:174!M C:G WC [cWW][XIX] 10.66 58.98; 60.2 1.22 -11.11 0.65 6.54
SRP_RNA 2V3C 156!M:173!M A:U WC [cWW][XX] 10.87 45.27; 50.6 5.33 -7.51 0.3 22.65
SRP_RNA 2V3C 157!M:172!M U:A WC [cWW][XX] 11.14 59.79; 54.27 5.53 -11.27 0.16 24.36
SRP_RNA 2V3C 158!M:171!M C:G WC [cWW][XIX] 10.88 50.65; 55.57 4.93 -9.04 0.74 16.97
SRP_RNA 2V3C 159!M:170!M U:A WC [cWW][XX] 10.58 59.52; 58.79 0.72 -0.18 0.29 7.08
SRP_RNA 2V3C 160!M:169!M C:G WC [cWW][XIX] 10.55 56.23; 49.95 6.29 -8.6 0.49 17.86
SRP_RNA 2V3C 161!M:168!M C:G WC [cWW][XIX] 10.55 53.95; 70.09 16.14 -0.62 0.02 10.11
SRP_RNA 2V3C 162!M:167!M U:G Wb [cWW][XXVIII] 10.0 73.12; 44.71 28.41 -1.4 0.05 1.76
SRP_RNA 2V3C 163!M:166!M G:G S_2_mo [---][-] 11.34 72.56; 23.03 49.54 -174.06 0.76 19.48
SRP_RNA 2V3C 165!M:212!M A:A rWb* [tWW][I] 14.27 25.69; 22.56 3.13 167.08 0.06 18.64
SRP_RNA 2V3C 165!M:208!M A:C rpS(sb:O2*-N3) [cSS][-] 6.07 92.79; 139.84 47.05 -13.92 1.82 14.02
SRP_RNA 2V3C 166!M:213!M G:G rS [tSS][IV] 8.29 78.32; 76.2 2.12 -148.1 0.3 28.34
SRP_RNA 2V3C 166!M:212!M G:A Wb_v [---][-] 12.13 71.2; 24.81 46.39 -120.47 2.42 24.25
SRP_RNA 2V3C 176!M:224!M A:U rpS(sb:O2*-N3) [cSS][-] 6.14 83.56; 144.95 61.38 -45.91 0.75 39.79
SRP_RNA 2V3C 177!M:223!M A:G rpS [cSS][-] 6.64 133.74; 106.96 26.78 -11.15 0.89 1.53
SRP_RNA 2V3C 177!M:198!M A:C fS(sb:O2*-N1)_1 [tSS][-] 8.73 48.42; 99.36 50.94 170.45 0.27 13.62
SRP_RNA 2V3C 185!M:233!M U:C rpS(ss:O2*-O2*)_1 [---][-] 4.69 151.98; 107.4 44.59 25.1 2.58 42.96
SRP_RNA 2V3C 188!M:230!M C:G WC [cWW][XIX] 11.0 46.28; 53.14 6.86 -11.11 0.63 22.32
SRP_RNA 2V3C 189!M:229!M U:A WC [cWW][XX] 10.54 60.8; 55.43 5.37 -9.3 0.24 13.81
SRP_RNA 2V3C 190!M:228!M G:C WC [cWW][XIX] 10.54 56.08; 52.9 3.18 -5.8 0.05 11.35
SRP_RNA 2V3C 191!M:227!M C:G WC [cWW][XIX] 10.67 48.7; 58.44 9.73 -13.12 0.36 20.45
SRP_RNA 2V3C 192!M:226!M C:G WC_Mo [cWW][XIX] 10.79 56.28; 61.97 5.69 -7.26 0.14 14.21
SRP_RNA 2V3C 193!M:225!M G:A S [tSH][XI] 9.39 100.21; 10.83 89.37 -21.66 1.46 33.21
SRP_RNA 2V3C 195!M:219!M A:A rS(sp:O2*-O1P) [---][-] 9.82 162.59; 106.42 56.17 115.03 0.02 83.78
SRP_RNA 2V3C 198!M:223!M C:G WC [cWW][XIX] 10.55 60.59; 51.7 8.89 -11.51 0.19 12.77
SRP_RNA 2V3C 199!M:222!M C:G WC [cWW][XIX] 10.21 52.79; 56.67 3.88 -11.55 0.13 10.62
SRP_RNA 2V3C 200!M:221!M G:C WC [cWW][XIX] 10.38 49.72; 53.49 3.77 -16.27 0.48 18.96
SRP_RNA 2V3C 201!M:220!M C:A Wb [cWW][-] 10.09 80.71; 36.71 44.0 -19.05 0.31 19.53
SRP_RNA 2V3C 202!M:219!M C:A S [tSH][-] 10.18 86.09; 9.79 76.3 -65.11 0.23 12.36
SRP_RNA 2V3C 203!M:218!M A:C rH_1 [rWH][XXV] 10.89 14.02; 22.6 8.58 168.38 0.13 5.54
SRP_RNA 2V3C 203!M:217!M A:G S(bp:N1-O2P)_2 [---][-] 12.26 44.69; 59.92 15.23 161.32 2.51 6.31
SRP_RNA 2V3C 204!M:217!M G:G S_1 [tSH][-] 11.88 1.08; 76.4 75.32 -136.63 0.19 11.49
SRP_RNA 2V3C 205!M:216!M G:A WC [cWW][VIII] 12.54 42.92; 43.92 1.0 1.94 0.52 22.04
SRP_RNA 2V3C 206!M:215!M C:G WC [cWW][XIX] 10.31 47.7; 55.16 7.46 -5.33 0.13 24.12
SRP_RNA 2V3C 207!M:214!M C:G WC [cWW][XIX] 10.71 43.57; 53.8 10.23 -4.7 0.02 16.71
SRP_RNA 2V3C 208!M:213!M C:G WC [cWW][XIX] 10.47 52.4; 51.17 1.23 16.54 0.54 7.74
SRP_RNA 2V3C 209!M:212!M G:A S [tSH][XI] 9.33 95.8; 10.77 85.04 -89.41 0.06 19.02
SRP_RNA 2V3C 142!N:236!N G:C Wb [---][-] 9.9 45.8; 65.87 20.07 -14.41 0.54 12.91
SRP_RNA 2V3C 143!N:235!N G:U WC [---][-] 10.25 50.14; 52.57 2.43 -8.34 0.17 10.34
SRP_RNA 2V3C 144!N:234!N C:G WC [cWW][XIX] 11.06 41.46; 53.49 12.04 -12.23 0.03 20.74
SRP_RNA 2V3C 145!N:233!N G:C WC_Mo [cWW][XIX] 10.74 53.96; 63.6 9.64 -14.41 0.67 20.18
SRP_RNA 2V3C 146!N:232!N G:A WC [cWW][VIII] 13.0 45.7; 50.42 4.72 -16.36 0.05 24.51
SRP_RNA 2V3C 147!N:183!N U:U Wb [cWW][XVI] 8.39 37.18; 76.12 38.94 -7.51 0.25 11.68
SRP_RNA 2V3C 148!N:182!N G:C WC [cWW][XIX] 11.01 51.08; 54.32 3.24 -4.63 0.91 20.73
SRP_RNA 2V3C 149!N:181!N G:C WC [cWW][XIX] 10.63 52.99; 56.76 3.77 -5.91 0.02 7.83
SRP_RNA 2V3C 150!N:180!N G:C WC [cWW][XIX] 10.57 55.17; 49.89 5.28 -7.49 0.07 12.88
SRP_RNA 2V3C 151!N:179!N G:C WC [cWW][XIX] 11.23 60.96; 51.11 9.85 0.61 0.1 3.69
SRP_RNA 2V3C 152!N:178!N G:C WC [cWW][XIX] 10.23 53.91; 56.46 2.55 -1.74 0.2 5.12
SRP_RNA 2V3C 154!N:175!N G:U Wb [cWW][XXVIII] 10.69 42.55; 69.79 27.24 -0.38 0.3 7.11
SRP_RNA 2V3C 155!N:174!N C:G WC [cWW][XIX] 10.5 54.04; 50.99 3.05 -7.68 0.23 17.57
SRP_RNA 2V3C 156!N:173!N A:U WC [cWW][XX] 10.9 47.49; 50.33 2.84 -19.1 0.01 20.19
SRP_RNA 2V3C 157!N:172!N U:A WC [cWW][XX] 10.74 50.67; 51.18 0.51 -3.32 0.2 13.55
SRP_RNA 2V3C 158!N:171!N C:G WC [cWW][XIX] 10.68 52.39; 56.96 4.57 -10.43 0.28 15.12
SRP_RNA 2V3C 159!N:170!N U:A WC [cWW][XX] 10.59 52.85; 57.06 4.21 -7.07 0.03 7.0
SRP_RNA 2V3C 160!N:169!N C:G WC [cWW][XIX] 10.35 54.19; 58.37 4.19 1.3 0.39 44.58
SRP_RNA 2V3C 161!N:168!N C:G WC [cWW][XIX] 10.4 51.68; 51.98 0.3 -5.6 0.11 4.59
SRP_RNA 2V3C 162!N:167!N U:G Wb [cWW][XXVIII] 10.14 67.61; 46.27 21.34 -4.08 0.29 5.35
SRP_RNA 2V3C 163!N:166!N G:G S_2_mo [---][-] 11.04 78.72; 23.34 55.38 -174.6 0.85 17.53
SRP_RNA 2V3C 165!N:212!N A:A rWb* [tWW][I] 13.65 24.86; 24.48 0.38 -179.78 0.08 21.62
SRP_RNA 2V3C 177!N:223!N A:G rpS [cSS][-] 6.69 131.29; 112.5 18.79 -18.29 0.22 10.94
SRP_RNA 2V3C 177!N:198!N A:C fS(sb:O2*-N1)_1 [tSS][-] 8.92 44.24; 93.7 49.46 174.28 0.85 14.19
SRP_RNA 2V3C 187!N:231!N C:G WC [cWW][XIX] 10.32 50.42; 58.83 8.41 -9.12 0.95 22.2
SRP_RNA 2V3C 188!N:230!N C:G WC_Mo [cWW][XIX] 11.11 62.49; 53.9 8.58 -17.98 0.72 18.04
SRP_RNA 2V3C 189!N:229!N U:A WC [cWW][XX] 10.65 56.23; 53.69 2.54 -6.56 0.21 12.75
SRP_RNA 2V3C 190!N:228!N G:C WC [cWW][XIX] 10.7 49.21; 52.45 3.24 -8.3 0.05 9.24
SRP_RNA 2V3C 191!N:227!N C:G Wb [---][-] 9.65 64.76; 49.03 15.72 -15.75 0.5 22.79
SRP_RNA 2V3C 192!N:226!N C:G WC [cWW][XIX] 10.22 52.04; 50.73 1.31 -8.28 0.05 8.51
SRP_RNA 2V3C 193!N:225!N G:A S [tSH][XI] 9.28 100.18; 10.52 89.66 -7.48 0.74 22.15
SRP_RNA 2V3C 194!N:224!N A:U rH_1 [tWH][XXIV] 10.56 6.28; 35.19 28.91 -86.99 0.36 7.38
SRP_RNA 2V3C 195!N:219!N A:A rS(sp:O2*-O1P) [---][-] 10.04 145.93; 113.24 32.68 107.67 0.09 75.95
SRP_RNA 2V3C 198!N:223!N C:G WC_Mo [cWW][XIX] 10.98 56.45; 58.63 2.18 -0.11 0.31 15.45
SRP_RNA 2V3C 199!N:222!N C:G WC [cWW][XIX] 10.39 56.48; 57.56 1.08 -10.9 0.27 6.91
SRP_RNA 2V3C 200!N:221!N G:C Wb [---][-] 10.68 46.38; 66.37 19.98 -20.9 0.85 24.28
SRP_RNA 2V3C 201!N:220!N C:A Wb [cWW][-] 10.42 73.52; 37.55 35.97 -20.73 0.02 21.18
SRP_RNA 2V3C 202!N:219!N C:A S [tSH][-] 10.14 86.27; 5.28 80.99 -107.0 0.19 10.58
SRP_RNA 2V3C 203!N:218!N A:C rH_1 [rWH][XXV] 10.73 9.86; 26.76 16.9 176.53 0.27 9.07
SRP_RNA 2V3C 203!N:217!N A:G S(bp:N1-O2P)_2 [---][-] 12.16 39.87; 55.05 15.18 165.94 2.66 9.5
SRP_RNA 2V3C 204!N:217!N G:G S_1 [tSH][-] 11.76 0.83; 72.43 71.6 84.38 0.24 8.77
SRP_RNA 2V3C 205!N:216!N G:A WC [cWW][VIII] 12.49 41.37; 45.59 4.22 0.38 0.32 16.84
SRP_RNA 2V3C 206!N:215!N C:G WC [cWW][XIX] 10.46 46.21; 51.93 5.72 -6.97 0.61 22.71
SRP_RNA 2V3C 207!N:214!N C:G WC [cWW][XIX] 11.22 50.66; 51.52 0.86 -10.43 0.1 13.81
SRP_RNA 2V3C 208!N:213!N C:G WC [cWW][XIX] 10.51 46.6; 57.84 11.24 9.26 0.41 6.61
SRP_RNA 2V3C 209!N:212!N G:A S [tSH][XI] 8.83 96.79; 10.87 85.91 -75.48 0.27 22.18
SRP_RNA 2V3C 209!N:211!N G:A S(sb:O2*-N7) [---][-] 7.61 91.16; 29.73 61.43 -172.74 2.44 26.22