Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2VAL
BPC Identified: 15
Ambiguities: 0
| tRNA |
2VAL |
1!A:72!C |
G:C |
WC [cWW][XIX] |
10.59 |
56.79; 61.28 |
4.49 |
-5.35 |
0.05 |
10.15 |
| tRNA |
2VAL |
2!A:71!C |
C:G |
WC [cWW][XIX] |
10.43 |
58.3; 58.32 |
0.01 |
-7.75 |
0.4 |
15.43 |
| tRNA |
2VAL |
3!A:70!C |
G:C |
WC [cWW][XIX] |
10.59 |
52.88; 52.67 |
0.21 |
-5.84 |
0.0 |
8.73 |
| tRNA |
2VAL |
4!A:69!C |
G:C |
WC [cWW][XIX] |
10.57 |
64.21; 51.27 |
12.94 |
-8.24 |
0.16 |
11.51 |
| tRNA |
2VAL |
5!A:68!C |
G:C |
WC [cWW][XIX] |
10.66 |
57.31; 58.6 |
1.29 |
-2.79 |
0.3 |
12.96 |
| tRNA |
2VAL |
6!A:67!C |
A:U |
WC [cWW][XX] |
10.27 |
67.38; 55.43 |
11.95 |
-10.25 |
0.16 |
18.73 |
| tRNA |
2VAL |
7!A:66!C |
A:U |
WC [cWW][XX] |
10.63 |
53.65; 52.11 |
1.54 |
-2.47 |
0.27 |
12.3 |
| tRNA |
2VAL |
68!C:71!D |
C:G |
rS(ss:O2*-O2*) [---][-] |
6.15 |
165.68; 117.6 |
48.09 |
-73.39 |
1.16 |
37.28 |
| tRNA |
2VAL |
1!B:72!D |
G:C |
WC [cWW][XIX] |
10.94 |
50.83; 49.01 |
1.82 |
-3.47 |
0.02 |
8.04 |
| tRNA |
2VAL |
2!B:71!D |
C:G |
WC [cWW][XIX] |
10.59 |
51.15; 53.79 |
2.64 |
-3.81 |
0.05 |
6.44 |
| tRNA |
2VAL |
3!B:70!D |
G:C |
WC [cWW][XIX] |
10.76 |
50.45; 60.91 |
10.46 |
-1.14 |
0.11 |
12.3 |
| tRNA |
2VAL |
4!B:69!D |
G:C |
WC [cWW][XIX] |
10.62 |
57.42; 52.74 |
4.68 |
-6.08 |
0.03 |
14.28 |
| tRNA |
2VAL |
5!B:68!D |
G:C |
WC [cWW][XIX] |
10.83 |
55.75; 50.66 |
5.09 |
-11.8 |
0.17 |
17.8 |
| tRNA |
2VAL |
6!B:67!D |
A:U |
WC [cWW][XX] |
10.96 |
57.32; 48.43 |
8.89 |
-9.11 |
0.05 |
16.11 |
| tRNA |
2VAL |
7!B:66!D |
A:U |
WC [cWW][XX] |
11.04 |
43.73; 57.76 |
14.03 |
-2.82 |
0.1 |
8.54 |