Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2W89
BPC Identified: 16
Ambiguities: 0
| tRNA |
2W89 |
901!A:972!B |
G:C |
WC [cWW][XIX] |
10.79 |
48.97; 56.69 |
7.73 |
-1.55 |
0.09 |
7.1 |
| tRNA |
2W89 |
902!A:971!B |
C:G |
WC [cWW][XIX] |
10.41 |
51.77; 56.13 |
4.36 |
-7.59 |
0.33 |
13.39 |
| tRNA |
2W89 |
903!A:970!B |
A:U |
WC [cWW][XX] |
10.29 |
60.14; 50.19 |
9.94 |
-2.65 |
0.33 |
9.2 |
| tRNA |
2W89 |
904!A:969!B |
U:A |
WC [cWW][XX] |
10.3 |
54.24; 58.91 |
4.68 |
-7.16 |
0.03 |
16.54 |
| tRNA |
2W89 |
905!A:968!B |
C:G |
WC [cWW][XIX] |
10.43 |
51.97; 55.17 |
3.2 |
-2.34 |
0.18 |
6.99 |
| tRNA |
2W89 |
906!A:972!D |
C:C |
rS(ps:O1P-O2*) [---][-] |
7.17 |
142.13; 122.53 |
19.61 |
146.99 |
2.22 |
24.07 |
| tRNA |
2W89 |
906!A:967!B |
C:G |
WC [cWW][XIX] |
10.52 |
56.77; 55.4 |
1.37 |
-8.15 |
0.08 |
11.02 |
| tRNA |
2W89 |
907!A:966!B |
G:C |
WC [cWW][XIX] |
10.55 |
52.63; 52.35 |
0.28 |
-1.3 |
0.06 |
4.3 |
| tRNA |
2W89 |
970!B:904!C |
U:U |
rS(ps:O1P-O2*) [---][-] |
7.24 |
124.55; 139.47 |
14.93 |
137.24 |
0.45 |
36.34 |
| tRNA |
2W89 |
901!C:972!D |
G:C |
WC [cWW][XIX] |
10.66 |
48.94; 54.37 |
5.43 |
-2.82 |
0.21 |
4.5 |
| tRNA |
2W89 |
902!C:971!D |
C:G |
WC [cWW][XIX] |
10.61 |
53.34; 58.23 |
4.9 |
-7.1 |
0.21 |
11.04 |
| tRNA |
2W89 |
903!C:970!D |
A:U |
WC [cWW][XX] |
10.34 |
57.18; 58.28 |
1.1 |
-13.03 |
0.07 |
21.99 |
| tRNA |
2W89 |
904!C:969!D |
U:A |
WC [cWW][XX] |
10.76 |
50.37; 53.7 |
3.33 |
-10.6 |
0.02 |
14.9 |
| tRNA |
2W89 |
905!C:968!D |
C:G |
WC [cWW][XIX] |
10.4 |
56.27; 58.6 |
2.34 |
-12.38 |
0.09 |
19.71 |
| tRNA |
2W89 |
906!C:967!D |
C:G |
WC [cWW][XIX] |
10.64 |
54.67; 54.0 |
0.67 |
-7.35 |
0.08 |
12.12 |
| tRNA |
2W89 |
907!C:966!D |
G:C |
WC [cWW][XIX] |
10.63 |
63.26; 50.56 |
12.7 |
-2.61 |
0.01 |
7.02 |