Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2XDB
BPC Identified: 13
Ambiguities: 0
| Misc_RNA |
2XDB |
1!G:16!G |
A:U |
WC [cWW][XX] |
10.59 |
51.68; 58.01 |
6.33 |
-3.72 |
0.64 |
19.09 |
| Misc_RNA |
2XDB |
2!G:15!G |
G:C |
WC [cWW][XIX] |
10.54 |
52.42; 57.32 |
4.9 |
-13.62 |
0.13 |
16.49 |
| Misc_RNA |
2XDB |
3!G:20!G |
G:A |
rS [tSS][-] |
8.19 |
87.33; 58.88 |
28.45 |
156.59 |
1.06 |
40.69 |
| Misc_RNA |
2XDB |
3!G:14!G |
G:C |
WC [cWW][XIX] |
10.42 |
56.61; 57.06 |
0.44 |
-19.13 |
0.51 |
28.85 |
| Misc_RNA |
2XDB |
4!G:13!G |
U:A |
WC [cWW][XX] |
11.23 |
50.56; 49.22 |
1.34 |
-14.09 |
0.49 |
29.12 |
| Misc_RNA |
2XDB |
8!G:9!G |
U:U |
pS [cSH][-] |
7.12 |
141.33; 39.59 |
101.74 |
-8.97 |
0.89 |
7.08 |
| Misc_RNA |
2XDB |
9!G:25!G |
U:A |
WC [cWW][XX] |
10.5 |
55.43; 56.49 |
1.05 |
1.32 |
0.18 |
5.33 |
| Misc_RNA |
2XDB |
10!G:24!G |
G:C |
WC [cWW][XIX] |
10.6 |
55.9; 54.96 |
0.94 |
-7.6 |
0.1 |
9.72 |
| Misc_RNA |
2XDB |
11!G:23!G |
C:G |
WC [cWW][XIX] |
10.41 |
59.79; 56.22 |
3.57 |
-3.6 |
0.41 |
14.76 |
| Misc_RNA |
2XDB |
12!G:22!G |
U:U |
Wb [cWW][XVI] |
8.93 |
77.11; 42.79 |
34.31 |
-11.7 |
0.62 |
19.38 |
| Misc_RNA |
2XDB |
14!G:20!G |
C:A |
rpS(bs:O2-O2*) [cSS][-] |
5.46 |
107.91; 153.32 |
45.41 |
-32.65 |
2.21 |
17.51 |
| Misc_RNA |
2XDB |
15!G:19!G |
C:A |
rpS(sb:O2*-N3) [cSS][-] |
5.14 |
161.73; 95.42 |
66.31 |
-36.41 |
0.1 |
30.26 |
| Misc_RNA |
2XDB |
21!G:22!G |
G:U |
pS* [cHS][-] |
6.57 |
148.0; 51.11 |
96.9 |
14.98 |
0.82 |
21.56 |